Trichophyton benhamiae: ARB_06870
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Entry
ARB_06870 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03022
Basal transcription factors
abe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ARB_06870
09124 Replication and repair
03420 Nucleotide excision repair
ARB_06870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abe03021
]
ARB_06870
03400 DNA repair and recombination proteins [BR:
abe03400
]
ARB_06870
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ARB_06870
Transcription machinery [BR:
abe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ARB_06870
DNA repair and recombination proteins [BR:
abe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ARB_06870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
DUF4677
Motif
Other DBs
NCBI-GeneID:
9520833
NCBI-ProteinID:
XP_003015110
UniProt:
D4AR41
LinkDB
All DBs
AA seq
830 aa
AA seq
DB search
MGLFGYVGAKGRASKRATPNPTSTPQSVSSDEYVEPEGSDGEEDNLKGMLRLDTTLHFTG
KNVVEKFTLQSYSQKSQAVKQDPHFGYKDFSSLALKPDHANRPLWIEPLKGTITLESFSP
LASQAQDFLTTIAEPLSRPTHLHEYRLTGNSLYAAVSVGLLPTDIINFLDRLSKTPLPET
LKSFIINFTKSYGKIKLVLKHNRFFVESSDTATLQMLLKDEVIGPQRIESSEITQQAAPK
MGGLVIPGTKDAAMMKQAPDQRATQVSERPAQSNEDDILVNLREEDDDEEQAQVHSFEIP
NTAVESVKARCQSMGCPALEEYDFRNDEINPTLDIDLKPIAQIRSYQEKSLSKMFGNGRA
KSGIIVLPCGAGKTLVGITAACTIKKGTIVLCTSSMSVVQWRNEFIRWSNIDPSDIAIFT
SDNKEKFRRSTGVIVSTYSMVSQTRARSHDAEKMMEWLQSREWGLMLLDEVHVVPAFMFR
TVTSAIATQTKLGLTATLLREDDKIKDLNFLIGPKLYEANWMELAEQGHIAKVQCAEVWC
PMTTEFYTEYMREKSRKAALLYIMNPRKFQACQFLIDYHEKRGDKIIVFSDNVFALERYA
LKLKKAYIYGGTPQNERLRILENFQHNEQVNTIFLSKIGDTSLDLPEATCLIQISSHYGS
RRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTDEMFYSSKRQAFLVDQGYAFKVITHL
QGIENLEGLAYATAEERLALLADVTLQNETSAAVEENADDLFNDRSAGGKSRGNKKAVRR
NAATLSGLAGGEDMAYIEHNKSRNKQLKERSSFFKKIDRDRAKRKKMLEQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggcttatttgggtacgtaggcgcaaaagggcgagcctcaaagcgtgcaactccgaat
cctacttcaacacctcagagtgtaagtagcgatgagtatgtcgagcctgagggcagtgat
ggtgaagaggataacttgaaaggcatgctccgtttggatactactttgcattttaccgga
aaaaacgttgtggagaaatttacgctgcaatcctacagccaaaaatcacaggccgtaaaa
caggatccgcattttggatacaaagatttctcttcccttgcattgaaacccgatcatgca
aaccgcccactttggatagagcccctaaaggggaccattacactggagagcttttctccg
ttagcatcacaagcgcaagattttctgacaactatcgctgaacccttgtcacggcccacg
catctccatgaatatcggctcacaggcaacagtctttatgctgctgtgtccgtcggactt
cttcctacagatatcatcaattttcttgataggttatcgaaaactcctctgcctgaaact
ctaaaatcgttcattatcaatttcacgaaatcatatggaaaaataaagctggtgctgaaa
cataaccggttctttgtggaaagctcagatacagctactttgcagatgcttctgaaagat
gaagttattgggccgcagagaatagagtcatccgaaattacacaacaggcagccccgaaa
atgggtggattggtaattccaggaacaaaggatgcggctatgatgaagcaagcgccagac
caacgcgcgactcaggtgtcagagaggcctgcccaatcaaacgaggatgacattctagtg
aacttacgagaggaagatgacgacgaagaacaagcgcaggttcacagctttgaaattcca
aatacagcagtggaatcagtgaaggctagatgccaatccatgggctgtccagcacttgag
gaatacgatttccgcaatgatgagatcaacccaactttggacattgacctcaaacccatt
gctcagattcgaagctaccaagaaaagagtttgagtaagatgtttggtaacggacgagca
aagagtgggattatcgtccttccctgtggtgctggtaaaacgctggtcggtattaccgca
gcatgcactatcaaaaagggtactatcgtcctctgcactagttccatgtccgttgtccag
tggcggaatgaatttattcgatggtcaaatattgacccgagtgatattgccatcttcaca
tcggacaacaaggagaagttccgacggagtacaggagttattgtatctacatactctatg
gtttcacaaacccgagctagatctcatgacgccgaaaagatgatggagtggctgcagtct
cgggagtgggggttgatgctgttggacgaagtccatgtcgtgcccgccttcatgttccga
acagtcacatccgctatagctacacaaaccaagctcggattgacagccacgcttctccga
gaggacgataaaatcaaagatttaaattttcttattgggcccaagctctacgaagcgaac
tggatggagcttgcagagcaaggtcatattgccaaagttcaatgcgcagaagtgtggtgt
cccatgactaccgagttttataccgagtatatgcgtgaaaagtccaggaaagccgctctt
ttatatatcatgaaccccagaaaattccaggcctgtcaattcttaattgattaccacgaa
aaacgaggcgataagatcattgtcttttcagacaatgtctttgcactcgaacgttatgct
ttgaagctgaagaaagcttacatttatggtggaacaccgcaaaacgaacgtctgcggatt
cttgaaaactttcaacataacgaacaagtgaacacaatatttctctctaagattggtgac
acatctctcgacctaccagaggcgacctgtttgattcaaatatcatctcactacgggtct
cgtcggcaggaagctcagcggctggggcgtatccttcgagctaagcgtcgtaatgatgaa
ggtttcaacgctttcttttactcccttgtgtcaaaggataccgatgagatgttttactct
tccaaacgtcaagctttcctggtcgatcaaggctacgcgttcaaggtgatcacccatctg
cagggtattgaaaatctcgagggtcttgcgtatgctacagccgaagagcgcctggcactc
ttagctgacgtaacacttcagaatgaaacttctgctgcggttgaggaaaatgctgatgat
ctgttcaatgatcggtcggctggagggaaatctcgtggtaataagaaggctgtgcgtagg
aacgctgcaaccctcagcggacttgctggaggagaagatatggcttatatcgaacataac
aagagtcgaaataagcagttgaaagaacggagctctttcttcaagaaaattgatcgagat
cgggcgaagcggaagaagatgctagagcaatag
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