Trichophyton benhamiae: ARB_07209
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Entry
ARB_07209 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
abe
Trichophyton benhamiae
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abe03021
]
ARB_07209
03036 Chromosome and associated proteins [BR:
abe03036
]
ARB_07209
Transcription machinery [BR:
abe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
ARB_07209
Chromosome and associated proteins [BR:
abe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
ARB_07209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_3
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
9527010
NCBI-ProteinID:
XP_003014647
UniProt:
D4ASJ4
LinkDB
All DBs
AA seq
1420 aa
AA seq
DB search
MSTHDLLQTEAVLDEEEDESFGEEGGQSKDVEENGHYDDSSEEELDDEDEDAVRAVREGF
IVDEEEEDEERTARRREKKKRRRQERIEEEELLDEDDLYLIRENNPDFELPMHNESKFKR
LKRGHKVGRDQPQGINDIFNSDEEDEVETYGRGRDRRNMHDDLDDFIEKDVFSDEDERQQ
EDEEIARPARKGLSGFAVTEATGLDEAALEDMRMAFGDGNDYLFALEMEDEEEEQEEDEE
KQLDLKDVFEPSQLAEKMMTDEDNIIRSTDEPERYQLARKPYQHVTLTEEQFREEAVWIS
NLMLLKKRLDSDLHEPFQRAVAKVLEFMVTDDWEVPFIFQHRKDYLIHAVKIPIPDGGTN
PDGGKYIVEAEKLLSMIDLWDIFEYDLKFRALIDKRNTLQTTYDNLQTIANVKDEMFEEM
LPAAITMEELQDVQDYLYFQYSIELKDMALATANHEGENGTAAQRRKASTKTFFERVRNS
RAYGLVRAFGITPDAFAQNVMETGRRQYIDDASEKPTDMADNLLDSSFSNGAHAMKAARS
MFAEELTMSPRVRKVMRQAFYMSGVIECYRTEKGLKKIDEHHPYYEFKYLRDQQISDIAR
RPELFLRMLKAEEEGLVDIKVHFKDFDNFKKRLYPEIQSDNSSEVADAWNKERKDVLDLA
LSKLEKIMSKGVKENIRSECENHVARECREVFSTRLDQAPYKPKGMILGTIPRVLALTNG
SGIVGKDPIYWTWVEEDGRVLEHGKFVDLTLGDPDRMIADGKDVEAFVELVERRKPDVIG
VSGQSPETRKLYKQLSELVQAKDLRGAFYTDERDEEVSDILEVVIVNDEVARLYQTSRRA
EVDHPGFSLQSRYCVALAKYLQNPMKEYASLGRDVVSIQFRPGQQLIPQDKLLKQLETAL
VDMVNLVGVDINEAVSDVSTANLLTYVSGLGPRKASQLLKVINMNGGVVNSRMELLGVNA
QYPAMGVKVWNNCASFLYIDYDNADPDTDYLDNTRVHPEDYDIGRKIAADALELDEEDIK
AETDENGQGAIVRKLIKEDAQDKVNDLLLEEYAEQLENNLNQRKRATLETIRAELQQPYE
ELRKQFVFLGTDAIFTMFTGETAESLAQGMVVPITIKRVSDDHIDGKLDCGIDALVPESE
MTDRYDIPVRSLYAPHQTTLAKITYLNRKSFVANVSLREDQVNKPYRRQLDHMRGEWDED
QEREDQEAMKEKTQTDQRALRVIKHPLFRPFNGRQAEEFLAPQSRGDVVIRPSSKGHDHL
AVTWKVADGVYQHIDVLELDKDNEFTVGRILKIGGKYSYTDLDELIVNHVKAMAKKVDDM
TVHEKYQSGTKEATEGWLTTYTTANPKRSAYAFCLDTKHPGYFHLCFKAGLKAPLNSWPV
KVIPQGYELQRTPYPDMRALCNGFKLLHANMLAAQQRRGR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcacgacctcttgcagaccgaagctgtcctggacgaggaagaagacgagtcc
ttcggcgaggagggcggccagtcaaaggatgtggaagagaatggtcactacgatgactcc
agcgaagaggagctagacgacgaagacgaggatgccgtgcgtgcggtccgagaaggcttt
attgtcgatgaagaggaagaagacgaagagcggacggccaggcgccgggagaagaagaag
cgtcggcggcaggagcgtatagaggaagaagagctgctggacgaagacgacctctacctg
atccgagaaaacaaccccgactttgaactccccatgcacaatgagtccaagttcaagcgt
ctaaagcgcggccacaaggtcggacgggaccagccacagggcatcaacgacatcttcaat
tcagacgaggaagatgaagtagagacatacggacgtggcagagaccggaggaacatgcac
gatgacctcgacgactttatcgaaaaggatgtcttctcagacgaggacgagcgccagcag
gaggacgaggagatcgcccgtccagccagaaagggactctctggtttcgccgtgaccgaa
gccactgggctcgacgaagccgctctcgaggatatgcgcatggccttcggagacgggaat
gactatcttttcgcccttgagatggaagacgaggaagaggagcaggaagaggacgaggag
aagcagctcgacctcaaggacgtgttcgaaccctcgcagctcgccgaaaagatgatgacc
gacgaagataacatcatacgttcgacagacgagcccgaacggtaccagcttgccagaaag
ccataccagcatgtcactctgaccgaggagcagttcagagaagaggctgtctggatatca
aacctcatgctgctgaaaaagcgactcgattcagatctacatgaaccattccagcgggcg
gtcgcaaaggtcctcgagttcatggttacggatgactgggaagtacctttcatcttccag
caccgaaaggactaccttatccatgctgtcaagatcccgattcccgacggtgggaccaac
cctgatggaggaaagtacatcgtcgaggcagagaagctgctcagcatgatcgacttgtgg
gatatcttcgagtacgaccttaaattccgtgccctcatcgataaacgaaacactctccag
accacatacgataacctacagacgatagccaatgtcaaggacgagatgtttgaggaaatg
ctccccgcagccattaccatggaagagctccaggatgtccaggactacctttacttccag
tactctatagaactcaaggacatggctctcgccaccgccaatcacgaaggagagaacggc
actgccgcccagcgccgtaaggcctctaccaagaccttcttcgagcgtgttcgcaacagc
cgtgcatatggactggttcgtgcattcggtatcactcccgatgcatttgcgcagaacgtc
atggagactggccggagacaatatattgacgatgcaagcgagaaacccaccgatatggcc
gacaacctcctggactcgagcttctccaacggagcccatgccatgaaggctgcacgctca
atgttcgctgaagaacttaccatgagtcccagggttcgaaaagtcatgaggcaggccttc
tacatgagtggagtgatcgaatgttaccggaccgaaaagggattaaagaagattgacgaa
catcatccatactacgaattcaagtacctccgtgaccaacagatctcggatatcgcgcgc
cggcctgagctcttcttgcgcatgctcaaggccgaggaagaaggtttggttgatataaaa
gttcacttcaaggactttgacaacttcaagaagcgcctttatcctgagatccaatctgat
aactccagcgaggttgcagatgcatggaacaaggagcgaaaggacgtcctagatctggct
ctcagcaagctggaaaagataatgagtaagggagtcaaggagaatatccgctcagagtgt
gagaaccatgttgcgcgcgagtgcagagaagtcttctcgacaagactcgatcaagctccg
tataagcccaagggaatgatcctaggaaccatcccacgagtcttggctcttacgaacgga
tctggaatcgttggaaaggatcctatctattggacttgggttgaagaagatggccgagtg
cttgaacatggcaaatttgttgatcttacccttggcgaccccgaccgcatgatagctgac
ggaaaggatgtggaagcctttgttgaactcgttgagcgccgaaaacctgatgttattggc
gtatcgggacagtctcccgaaacaagaaagctgtacaagcaactatcagagcttgtccaa
gcaaaggacctgcgcggtgctttctacacagatgagcgagatgaggaagtcagtgatatc
ctggaagttgtcatcgttaatgacgaggttgccagattataccagaccagccgcagagct
gaagttgaccaccctggattcagtctacaaagtcgatactgcgttgccctagcaaagtat
ctgcagaatccaatgaaggagtatgcctcactaggaagagatgtggtgtccatccagttc
agacctggtcagcaacttataccccaggacaagctattaaaacagctagaaaccgctttg
gtggacatggtcaacctggttggtgttgatatcaacgaagctgtcagcgatgtctcgaca
gccaacctccttacatatgtctccggccttggtccacgaaaggcatctcaactattgaaa
gtcatcaatatgaacggcggcgtggtaaacagccgtatggaactcttgggagtcaatgcc
cagtacccagccatgggagtcaaagtctggaacaactgcgctagtttcctgtacattgat
tatgacaacgcagacccagacacagactacctcgacaacactcgtgtccatcctgaagat
tacgatatcggcaggaagattgctgctgatgcccttgagctcgatgaagaagatatcaag
gcagaaacagacgagaatggacaaggcgccattgttcgaaaactcatcaaggaagatgcc
caagataaggtcaacgatcttcttctcgaagaatacgccgagcagctggaaaacaaccta
aaccagcgcaagagagctactctcgaaaccatccgtgccgaactgcagcaaccctacgaa
gagctacgaaaacagtttgtgttcctcggtaccgatgccattttcacaatgtttaccggt
gaaaccgccgagtcgttggcccagggcatggttgtgcctatcaccatcaaacgtgtctcg
gacgaccatattgacggcaagcttgactgtggaatcgatgctcttgtacccgagtcagaa
atgacagatagatacgacattcctgttcgaagtctctacgcgcctcatcagactactttg
gcgaagattacctacctaaaccgaaagtcgtttgtagccaacgtttctctccgagaagac
caggtgaacaagccataccgtcgacaactagaccacatgcgcggcgaatgggacgaggat
caagagcgagaagaccaggaggctatgaaggagaagacccagaccgaccaacgtgctctg
cgtgttatcaaacacccactcttccgtccgttcaatggcagacaagcagaggaattcctt
gcacctcagagccgtggtgacgtcgtaattcgtccttcatccaagggccacgaccatctt
gctgttacttggaaggtagctgatggagtataccagcacattgatgttttggaattggac
aaagacaacgagtttaccgttggaagaatcctgaagattggcggtaaatattcgtacact
gatctcgacgagctaatagtcaaccacgtcaaggccatggccaagaaggtggatgatatg
acggtgcatgagaaatatcagagcggcaccaaggaggcaacagagggctggttgacgaca
tacaccaccgccaaccccaaacgatcagcttatgccttctgccttgataccaagcacccc
ggatacttccacctctgcttcaaggccgggttgaaggcaccactgaacagctggcctgtc
aaggtgattccgcaaggctacgaactgcaacgtactccataccccgatatgcgagctctc
tgcaacggattcaagcttcttcatgccaacatgcttgccgcccaacaacgacgtggacgg
tga
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integrated database retrieval system