Trichophyton benhamiae: ARB_07378
Help
Entry
ARB_07378 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
abe
Trichophyton benhamiae
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abe03019
]
ARB_07378
03041 Spliceosome [BR:
abe03041
]
ARB_07378
03036 Chromosome and associated proteins [BR:
abe03036
]
ARB_07378
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ARB_07378
Messenger RNA biogenesis [BR:
abe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
ARB_07378
mRNA cycle factors
Common to processing body (P body) and stress granule
ARB_07378
Spliceosome [BR:
abe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
ARB_07378
Chromosome and associated proteins [BR:
abe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
ARB_07378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9520354
NCBI-ProteinID:
XP_003014817
UniProt:
D4AT14
LinkDB
All DBs
AA seq
595 aa
AA seq
DB search
MSVASSTEAIIMPPGPLEDMSNVADALPEAEEAAAMAREKGWVVPQRYNYEAYNALNRDD
YADALPWASNSAKYEWKEEYGDIGPPNEELEQMLFKDEYIPRVGKLLENIRQIQVTAETT
ERPDPIKSFEDAGLHPIMLNNIKLCGYIVPTPVQAYCIPAVLTGHDLIAVAQTGSGKTAA
FLIPVLSKLMGKAKKLAAPRPDLGNGFNESLDAVRAEPLVLIVVPTRELATQIFDEARRL
CYRSMLRPCVIYGGGPSRDQRMELQKGCDILIATPGRLIDFMEKPNILSLCRVRYTIIDE
ADELLKSDWDVEFTKILAGGDINEDADHRYMMFSATFNKGCRQVARKFLANDYVRIRIGR
VGSTHLNVTQQLVWAEENMKKKCLYDLLMAMPPSRTIVFVNNKTQADLIDDFLFNMGLPS
TSIHSDRTQREREDAIRAFKTAKSPILIATAVSARGLDIKNVMHVVNYDLPSVNHGGIDE
YIHRIGRTARIGNPGLATSFYNDKNSDIASDLVKILVESKQVIPDFLQSEVPPDGVLDFN
DDTDDEAGNDDNAGDDGWGAAALPPVAAGFAEAANGKSEAETQGGWGSGPADGEW
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgctagctctacggaggctatcatcatgcctccagggccgctcgaggacatg
tctaatgtcgccgacgctcttcctgaggccgaagaggcggccgccatggctcgcgagaag
ggctgggttgtgcctcagcgctacaactacgaggcttacaacgctctgaaccgtgacgac
tatgccgatgccttgccatgggcgtctaactcggccaagtacgagtggaaggaagaatat
ggtgatattggtcctccaaacgaagagcttgagcagatgcttttcaaggatgagtatatt
cctcgcgttggcaagttgcttgagaacattcgccaaatccaagtcactgctgaaactact
gagcgtcctgatcccatcaagagtttcgaggatgctggcttgcatcctatcatgctaaac
aacatcaagctttgcggctatattgttcctacccctgttcaagcctactgcattcccgct
gtcctgactggccatgatttgattgcagtcgctcagaccggatctggaaaaaccgctgcc
tttttgatccctgtcttgtctaagcttatgggaaaagcgaagaagctcgctgctccccgt
ccggacctgggcaacggtttcaacgagagcttggatgccgttcgagctgaaccacttgtc
cttattgttgttccaacccgtgagttggctacccagatttttgatgaggcacgtcgtctc
tgctatcgctcaatgctacgcccatgcgttatctacggaggtgggcctagtcgtgaccaa
cgcatggagctccagaaaggctgtgacatcttgattgctactcctggtcgtcttatcgac
tttatggagaagcccaatattctttctctctgccgcgttcgctacaccatcattgacgaa
gctgatgaacttctcaagtccgactgggacgtcgagtttaccaagatccttgccggtgga
gatattaatgaggatgctgatcatcgttatatgatgttttctgccaccttcaacaagggc
tgtcgtcaggttgctcgcaagttcctggccaatgactatgttcgaatccgcattggccgt
gttggcagcacccatttgaacgtcactcagcaacttgtttgggctgaagaaaacatgaag
aagaaatgtctctacgatctgttgatggccatgcctccatcccgtaccatcgtgtttgtc
aacaacaagacccaggccgatttgatcgatgatttcttgttcaacatgggattgcctagt
acttccatccactcggaccgtacccagcgtgaacgtgaagatgccatccgtgcctttaag
actgcaaagtctccaattctgattgctaccgctgtctctgctcgcggtcttgatatcaag
aatgtcatgcacgttgtcaactacgacttaccttccgttaaccacggtggtatcgacgaa
tacattcaccgcattggccgcactgcgcgtatcggcaacccaggtctagctacctctttc
tacaacgacaagaactctgatattgctagcgacctggtcaagatcctcgtcgaatctaag
caagtcatccctgactttttgcagagcgaagttccaccagacggtgtgcttgacttcaac
gatgataccgatgacgaagccggtaatgatgataatgctggtgacgatggctggggtgct
gccgcccttcctccagttgctgcaggctttgctgaggctgctaatggcaaatctgaggca
gagacccaaggtggttggggcagtggtcctgctgatggtgagtggtaa
DBGET
integrated database retrieval system
