Trichophyton benhamiae: ARB_07689
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Entry
ARB_07689 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_07689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_07689
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ARB_07689
Spliceosome [BR:
abe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
ARB_07689
Complex C
U4/U6.U5 tri-SnRNP related factors
ARB_07689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
Helicase_C
HA2_C
DEAD
PWI
AAA_22
AAA_19
nSTAND3
Cas3-like_C_2
AAA_30
SRP54
T2SSE
DUF7296
ABC_tran
Sigma54_activ_2
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
9521387
NCBI-ProteinID:
XP_003013969
UniProt:
D4AU59
LinkDB
All DBs
AA seq
1095 aa
AA seq
DB search
MDIKTYISDSLLQLTGVSDPTVVDFVLATASKAKSQESLREQLGVFLDGGNADIQPFCTQ
LWSRVNPSGRDGKSSKDKPTQQQPKKKYRLVEMEDEIADNDLNPSKAQSRESGSSRSRST
TKNRNDGSSEHKKRDSHADGREHNRPRKLRRIDKHDFESRWGDEEPPSGEDEQYESPAEN
LPDKVNVSHDVEAFDHSEEDPEKARERDRRERDEFAKRLISKDDKRSRKVVEDRSSKKDG
GTASRRALAEDSAARAAAMPDLRLRSRQDYLKKREAERLALLRKQVAEETAELRENPDLT
RQEKEEFAKNREVLKLAEERLQIDDHRDGYFLPEDYITEKGKIDRKRKEEALYKRYVDRD
DHGKERFVTEHEEWELEQTAKAKAQIQKAEFVDEGDYEYVFDDAQKVNFIMDSKMAGDRK
PMTKEQMLLHKQIDAAEQKAKSIEETRKSLPIYQFREQILDAVANHQVLIIVGETGSGKT
TQIPQYLHEAGYTKGGMKVGCTQPRRVAAMSVAARVAEEVGVKLGDEVGYSIRFEDTTSD
KTVLKYMTDGRLLRELLMEPDLASYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLL
ISSATMDAQKFQKYFDDAPIFNIPGRRYPVDIHYTSQPEANYLAAAITTVFQIHISQGPG
DILVFLTGQEEIESAEQNLLETARKLGNKIKELVVCPIYANLPSELQTKIFEPTPPGARK
VVLATNIAETSLTIDGIVYVIDPGFVKESVFNPRTGMESLVVTPCSRASAGQRAGRAGRV
GPGKCFRLYTKWAYYNELEQNTTPEIQRTNLSGVVLMLTSLGITDLLDFDFMDPPPAETL
IRALEQLYALGALNDRGELTKVGRQMAEFPTDPMLSKSILAADKYGCVEEILSIIAMLGE
ASALFYRPKDKKIHADSARARFTVKDGGDHLTLLNIWNQWVDADFSYVWARENFLQQRSL
TRARDVRDQLARLCDRVEVTLSSAGANNLPVIQKAVTAGFFPNAARLQRGGDSYRTVKNG
QTVYLHPSSTLFGTDPKWVIYFELVLTSKEFMRSNMPLQPEWLTEVAPHYHKKKDLETLG
LGKPKGQHTTEKSKS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaagacatacatctcagattccctccttcaactcaccggagtttcagaccct
acagtcgttgatttcgtccttgcaactgcttcaaaggctaaatcacaagagtctctgcgc
gaacaacttggggtgtttttggatggtggaaatgcagacatacaacccttctgtacgcaa
ttatggagtcgtgtgaatccctcggggagagacggcaaatcttcaaaggacaagcccacc
cagcaacaaccgaagaaaaagtatcgcttggttgaaatggaggatgaaatagcggataac
gatcttaatcctagcaaggcgcaatcaagggagtcagggtcgtccaggtctcgatctaca
acaaagaataggaatgatggcagtagtgaacataagaagagggatagtcatgcggacgga
cgagaacacaatcgaccacggaaacttcgccgaatagataagcacgattttgagagccga
tggggcgatgaagaacccccttcaggcgaggatgagcagtacgagtctcccgcagagaat
ttgccggataaagtcaatgtttcccatgatgttgaggctttcgaccactctgaggaagac
cctgaaaaggccagggagcgtgataggagggagcgggatgagtttgctaaacggcttatc
tcaaaggatgataaacggtccagaaaagtggttgaagataggtcatctaagaaagatggt
ggaacagcttcgcgaagggcacttgcagaggactcggctgctagggccgctgcaatgcca
gatcttcgactacgttctcgacaggactatctgaagaagcgagaggctgaacgcctagct
ttgttgcgcaaacaagttgcggaggagacagcagaacttcgagaaaatcctgacttgaca
cgacaggagaaagaagagtttgcaaagaacagggaggttttaaagctagccgaggagcga
ctgcaaattgatgaccatcgagatggctatttcctccctgaggactacataacggagaaa
gggaagatagaccggaagagaaaagaagaagcactatataagcgatatgttgaccgtgac
gaccatggaaaggaacgttttgtcacagagcatgaagaatgggaacttgagcaaacggca
aaagctaaagctcagatccaaaaagcagagttcgttgatgaaggagattatgagtacgtt
ttcgatgatgcgcagaaagtgaactttatcatggattcaaagatggctggtgaccggaaa
cctatgacaaaggaacaaatgcttttacacaagcagattgatgccgctgaacagaaagca
aagtcaatagaagaaactcgaaaaagcttgccgatttaccaatttcgagaacagatccta
gatgcggtagctaaccatcaggttttgatcatcgtcggtgaaactggtagcggaaagacg
actcaaatccctcaatatttacatgaagcaggatatacaaaaggtggcatgaaggtcggc
tgtacgcagccacgacgagttgctgccatgagcgttgccgcacgtgtggcagaggaagta
ggggttaagcttggtgatgaagtgggatactctattcgatttgaagatactacctccgat
aaaacggtattaaagtatatgactgatggtcgtttactacgtgaactgcttatggagcca
gatcttgcttcatactctgcactcatgattgatgaagcccatgagcgtaccgtcccgaca
gatattgcttgtggcttattgaaagacattgctaaagctcgaccggatttaaagcttctt
atctcctccgctacaatggatgcacaaaagtttcaaaagtattttgatgatgcccctata
tttaatatccctggccggagataccctgttgatatccattatacatctcagcccgaggcc
aattacctggcagccgcaatcacaacggtttttcaaatccatatctcccaaggaccgggt
gatatactagtgtttttgacaggccaagaagaaattgaatcagcggaacagaatctgttg
gaaacggcccggaagcttggaaataaaatcaaggagctagttgtttgccctatttacgca
aatttgccctctgagcttcagacaaagatatttgagcccactcctccgggagctcgaaaa
gttgttcttgctacaaatattgccgagacaagtttaacaatcgacggcattgtgtacgtt
attgatccgggattcgtcaaggagagcgtctttaatccccgcactggaatggaaagcctt
gttgtcaccccatgttctagagcatctgccggtcaaagagctggtcgcgctggtcgtgtt
ggcccgggaaagtgcttccgtttgtataccaagtgggcgtattataacgaacttgagcag
aataccacaccagaaatccagcgcacaaatcttagcggtgtggtgctcatgttgacttca
ttgggaataactgatctacttgattttgatttcatggatccacctccggccgaaacattg
attcgtgctcttgaacagctttatgcattgggagccttgaacgaccgtggagaacttacg
aaagttggccgtcagatggcagagtttccaacagatcccatgctctcgaaatcaatcctg
gcagcagacaagtacggctgtgttgaggagatcctatccatcatcgccatgctgggagag
gcaagtgcacttttctacaggcccaaagataagaagattcatgcagacagcgctcgggct
cgattcactgtcaaagatgggggtgaccacctaactcttctcaacatctggaatcaatgg
gtagatgctgatttcagctacgtctgggcgagggagaacttcctccagcaaagaagctta
acccgtgcccgtgatgttagggaccaacttgctaggttatgtgaccgtgttgaagttacc
cttagcagcgcaggagcaaacaacctccctgtgatccagaaagctgtgacagcaggcttc
ttccctaacgctgcacggcttcagcgtggaggagacagttatcgaactgttaaaaatggc
cagactgtctacctccacccatcaagcactctatttggaacagatccaaaatgggttatc
tacttcgagctagtgttgactagcaaggagttcatgcgtagcaatatgccgctgcaacca
gaatggttaaccgaggttgctcctcattatcataagaagaaagatcttgagactcttggt
ttaggtaagccaaagggacagcataccacagagaaatcaaaatcatag
DBGET
integrated database retrieval system
