Acinetobacter bereziniae: BSR55_05020
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Entry
BSR55_05020 CDS
T06609
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
aber
Acinetobacter bereziniae
Pathway
aber02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aber00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSR55_05020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aber03021
]
BSR55_05020
Transcription machinery [BR:
aber03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSR55_05020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
ATZ62755
LinkDB
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Position
complement(1093147..1095039)
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AA seq
630 aa
AA seq
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MSEMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APETDDAMFDGNSEAGDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYKDYEAGERRLADILSGYLDPETDEAIPE
VLEDESEDLDEDETSSSTKPAKDVKLDDDDEDEESESDDDSEGESGPDPEIAKVRFDELE
AVWNAAKETIAQHGRNSAQGVEAMEALATVFMMFKFTPRLFDIISEMIRGTHEQIRTSER
EVMRYAVRRGRMDRTQFRTSFPGQESNPAWLDEQIAKAPAEMKGYLEKVRPDVLAFQQKI
ADIEKELNLNVKEIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDL
IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIN
RVSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIE
DSNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTR
ERIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatgcattcccctacttcacaagtagcggctcttattagccgaggcaaagaa
caaggttacttaacctacgctgaggttaacgatcatctcccagactcaatcacagaaagc
gaacagattgaagacattattcaaatgcttcaagacgtgggtattcctgtacacgaacgc
gcaccagaaaccgatgatgcaatgtttgatgggaatagcgaagctggcgatgaagttgca
gaagaagaagctgctgctgtacttgcctctgtagaaaatgaacctggtcgtaccactgac
cctgtacgtatgtatatgcgtgaaatgggtactgttgaacttcttacacgtgaaggcgag
attagtatcgctaaacgtattgaagaaggtattcgtgacgttttacattcaatcgcttac
tggccaaatgctgtagaagttgtactacaagaatacaaagattatgaagctggtgaacgt
cgccttgctgatattctttcaggttatttagaccctgaaacagatgaagcaattcctgaa
gtattagaagacgaatcagaagatttagatgaagatgaaactagttcatcaactaaacct
gccaaagacgttaaattggatgatgatgacgaagatgaagagtcagaaagtgatgatgat
tctgaaggtgagtctggtccagatcctgaaatcgctaaagttcgtttcgatgaattagaa
gcggtttggaatgcagcgaaagaaacgattgctcaacatggtcgcaacagcgctcaaggt
gttgaagccatggaagcgcttgcaactgtatttatgatgttcaaattcactccacgtttg
tttgacattatttctgaaatgattcgtggtacacacgagcaaattcgtacttctgaacgt
gaagtgatgcgttatgcggttcgtcgtggacgtatggaccgtacgcaattccgtacatca
ttcccaggtcaagaatcaaatccagcatggttggacgagcagattgctaaagcaccagcg
gagatgaaaggctatttagaaaaagttcgcccagatgtattggcatttcaacaaaaaatt
gcagacatcgaaaaagaacttaatctaaacgtgaaagaaattaaagatatttctaaacgt
atggcgattggtgaagcgaaagctcgtcgtgccaaaaaagaaatggtggaagcaaactta
cgtttggtaatttcgattgcgaaaaaatataccaaccgtggtctacaattcctcgacttg
attcaagaaggtaatattggcttgatgaaagcagtagacaagtttgaatatcgtcgtggt
tataaattctcgacctatgcaacttggtggattcgtcaggcgattactcgttctattgct
gaccaagcacgtacaattcgtattccagtccacatgatcgaaacaattaacaagatcaac
cgcgtatctcgtcaattgcttcaagaaatggggcgtgaaccaacacctgaagaattgggt
gaacgtttagagatggacgaagttaaagttcgtaaagtgctcaaaatcgccaaagaaccg
atttctatggaaacgccgattggtgatgatgaagattcgcatcttggagatttcattgaa
gacagcaacatcacgtcacctgttgatgctgcaacttcagaaggcttaaaagaagcaacg
cgtgaagtgcttgaaaacttgactgaacgtgaagccaaagtgttgaaaatgcgttttggt
attgatatgccaacagaccatactttggaagaagttggtaaacaatttgatgtgacacgt
gaacgtatccgtcagattgaagcaaaagcattacgtaaacttcgtcatccttcacgttct
gagcatttgcgttcattccttgaaaatgactaa
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