Acinetobacter bereziniae: BSR55_05630
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Entry
BSR55_05630 CDS
T06609
Name
(GenBank) type IV secretion protein Rhs
Organism
aber
Acinetobacter bereziniae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ATZ62854
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All DBs
Position
1216578..1221398
Genome browser
AA seq
1606 aa
AA seq
DB search
MAFIDSKNQTAGSNTTETSRTDNTKPAIELAVFNLASVTHTEDHKFIAHQIQKYLQACGN
TSLEQIKASANVPTVANIFALSGSVLDLILFAAEPKQADAGVQQAALLSMNLIGLFLQPN
TEAHVRMALRPMLGLMAECLYPANGKIKEADLRRMQLHLNAQMAGDLEKFLQETQAKLTG
LLSSATTLGSSILQAFTTSVAGGLPSIASAGATAEKRDPSLQFSNWAQPLIDLLGAPAQA
DMTAKISAPHLTLQTEVQKAAPLLATAIQQQSNAGTRYSLAWLIQETLNAIQTQGKKATA
SVPLNQTGEHEQHINGDILEFVTLQPDALNDPICATLIEDQSSKTEHSISYAIGAERVNH
ADFYLPKLGFVFSRQYNSQMDEFDYSMIGARWMMPFSNVIIHNAQGYLFIDSNGRKHQLP
ASIVDERYQVPFEGFSVAPYEQGDLLLNFGSDWNFHFHSFNAGKHYHLVQQFNEQTDEKV
VLTYLLYEQFAYLQGIDFQLKRAKHLLKFAFNEQAKIIAAFVDEQAQPLARYEYDTQGNL
IKATDQNGHTRSYEYNQAHQLTRYTDRTGRGQNIRYESTSPKAKAIAEWADDGSFKTRLE
WHPRLRQVAVYDAYDVPTYYYFDLDGFTYRTRLADGREKWISRDRQKRITRQIDFTGLET
EQVYNDQDQLVKIVQPNGGIILFAYDEAGNLTETKDPEGNIWKKEYDADGNVSKDINPLG
QTTQYKYNNDNQLVEVIDAKGGSKKIQYNDLGQMISYTDCSGKSSAWEYDEDGTLTAQAA
ADAQQVQYLYSTQGKDKGQLQTIIYPDGLKEQFEHDEEGRLLKHIDSKGLITQYQYNPVG
LLEQRIDANRHQIGYQWDKQGRIQKLINQNHAEYLFDYNRYGQLIREQAFDGEEKHFSYD
ENGFLSQIRQPNILTEFSYHQGGAIASKTYTHLQTRHRQVEEFEYNLNSQLSKASNTESQ
IDFYRNPLGQLVREHQHYKVPNLPALSAVLRYEYDELGNLTQTIRPDGQVQANLSYGSGH
IYGIAFNQQDMVAFQRDDLHRETTRLLANGLVQNKNYNDMGLLSSQIIRHEQETLDQLQQ
PQLQQAKHQAERHYHYDNNYLLTQVDDSRLGKLSYQYDPIGRLIKAQNPYSSESFSFDPA
GNLIDPIATQTSQVKNNLITQYQGKHYKYDAQGNVIETSQSGQTLKLTWDNLNRLIQSDH
NGQITSYGYDVFGRRLYKHSLNDAKTEHSSELTLFGWDGDLMIWESYKTNSNQANKQDYT
KHYVYEPDSFVPLLQTGYTRFIELIETPDYRQFQDVPYSIYKDPVWKTDTQKNKAELERV
AFYHCDQVGTPQTLSNELGECIWEIKQDTWGTTQEIKTANESNPLEQSNLRFQGQYYDKE
TGLHYNRYRYYEPYSARYVSKDPIGLFGGLNNSVYVNDPNQWIDPMGLNESLGSAMKDAF
VDRIPGSQIPSRLKNKPGAVQMTDRVLTGMNANVTAAALVGVSASASYDGNGKYSVKGGN
TYGIALEATTTREVLNAGNLKDGKYYEACASAGAGLAVSVCGGYSMNGGFYGNIALGVGL
GASLSGVSGEKRSYDPLAPKTVVDHEQLKRNQQMLPQGPLNFGGLR
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggcatttatagacagtaaaaaccagaccgcagggtccaatacaacagaaacatctcgc
acagacaatacaaagccagcaattgaattggcagtatttaacttagccagtgtgacgcat
acagaagaccataaatttattgcgcatcaaattcagaaatacctacaagcatgcggaaat
accagtctcgaacaaatcaaagctagcgccaatgtcccgacagtagccaacatttttgca
ttgtctggtagtgtgttagatctgattctatttgccgcagaacccaaacaagctgatgct
ggtgtacaacaagcagcattgttgagcatgaacttaatcggtttatttttacaaccgaac
accgaagcccatgtgcgtatggcattacgtccaatgttggggttaatggctgagtgttta
tatccagccaatggcaaaatcaaagaagccgacttacgtcgtatgcagttgcaccttaat
gcacagatggcaggtgatttagaaaaattcctacaagaaacacaagctaaactcacaggc
ttactgtccagtgcaacaacactggggtcttcaatcttgcaagcctttaccaccagtgtg
gcaggtggattgccaagcattgcttcagccggtgcaaccgctgaaaagcgagaccccagc
ctacaatttagcaattgggcacagccattgattgatttgttgggcgcacccgcacaagca
gacatgactgcaaagatttcagcgcctcatttaactttgcaaacggaagttcaaaaagcc
gccccattacttgctacagcgatccaacaacaaagcaatgcgggtacacgatatagccta
gcttggctgattcaagaaaccctaaacgccattcaaacacagggaaaaaaagccacagcc
agcgtccccctcaaccaaacaggcgaacatgaacaacatatcaatggtgatattttagag
tttgtgaccttacagcctgatgcgttaaatgatccgatttgtgcaacattaattgaagat
caaagctccaaaacagaacacagtattagctatgcgataggtgctgaacgggtcaatcac
gcagacttctatttacctaaactgggttttgtctttagccggcaatataactcacagatg
gatgagtttgactacagtatgatcggtgcacgatggatgatgcctttttccaatgtgatc
atacacaacgcacagggctacttatttatcgacagcaatggacgcaaacaccaactacca
gcctcgattgtcgatgaacgctatcaagttccttttgaaggttttagtgtcgcaccctat
gaacagggagatttattactcaactttggttcagactggaacttccattttcatagtttt
aatgctggaaaacattaccatctggtccaacaattcaatgaacagaccgatgaaaaagtc
gtactgacctatttattatacgaacaatttgcctacttgcagggcatcgatttccaattg
aaacgtgccaaacatttacttaaatttgcttttaacgaacaagccaaaatcattgctgca
tttgttgatgaacaagcacaacccttagcacgctatgaatacgatacacagggcaacctg
atcaaagccacggatcaaaatgggcatacgcgcagttatgaatataaccaagcccatcaa
ttgactcgctataccgatcgtacagggcgtggacaaaacattcgttatgaatcgacctcg
cccaaagccaaagcgattgcagagtgggcagatgatggcagctttaaaacccgcttagaa
tggcatccacgcctacgtcaagttgcggtctatgatgcctatgatgtaccaacctattac
tatttcgacttagatggttttacctaccgtacccgtttagccgatggtcgagaaaagtgg
atttcccgtgatcgtcaaaaacgcattacccgacaaattgactttactgggcttgaaacc
gaacaagtgtacaatgaccaagatcaattggtaaaaatagtacagccgaatggaggcatc
atcctgtttgcctatgatgaagcaggcaacctgaccgaaaccaaagatcctgaaggcaat
atctggaagaaagaatatgatgcagatggcaatgtcagcaaagacattaacccattaggg
cagaccacccaatataaatataacaatgacaaccaattggttgaagtgattgatgccaaa
ggtggctcaaagaaaatccaatataacgaccttgggcaaatgatctcctataccgactgt
tcaggaaaaagcagtgcttgggaatatgatgaagacggaacactgacagcacaagctgct
gcggatgcacaacaagtccaatatctatatagcactcaaggcaaagacaaaggacagctg
caaaccatcatttatcctgatggattaaaagaacaatttgaacacgatgaagaagggcgt
ctactcaaacatatcgatagcaaaggcttaatcacccaataccaatacaacccagttggg
ttattagaacaacgcattgatgccaatagacaccaaatcggctaccaatgggacaaacaa
ggtcggattcaaaaactgatcaaccaaaaccatgctgaatacttatttgattataaccgt
tatgggcaattgatccgtgaacaagcctttgatggagaagaaaaacactttagttatgat
gagaatggattcctatcgcaaatccgccaaccgaatattctgactgaatttagctaccat
cagggtggagcgattgcatcaaagacctatacccatctgcaaactcgacatcgtcaagtt
gaagaatttgagtacaacttaaatagccaattgagcaaagccagcaatacagaaagccaa
attgacttttatcgcaatccacttgggcaattggtacgagaacaccaacactacaaagtc
ccgaatctgcctgcactgagcgcagtgctacgttacgaatacgatgaattgggcaatttg
actcaaaccatccgacctgatggacaagtccaagccaatctcagctatggctcagggcat
atttatggcattgcttttaaccaacaagacatggtggcatttcagcgagatgatttacac
cgagaaaccacacgcttgcttgccaatggcttggtgcaaaacaaaaactataatgatatg
ggcttactcagttcacaaatcattcgacatgaacaagaaacactcgatcagttacaacaa
ccccaattacaacaagcaaaacatcaagcagaacgacattaccactatgataacaactac
ctactgactcaggtggatgacagccgattaggcaaattaagctatcaatacgacccaatt
ggacgcttaattaaagcgcaaaacccgtatagttctgaaagttttagttttgatccagcg
gggaacttaatcgacccgattgcgacacaaacatcacaagtcaaaaataacctgatcacc
caatatcaaggcaagcactacaaatatgatgcgcaaggcaatgtgattgaaaccagtcaa
tcaggtcaaacattaaagctgacttgggataacctcaatcgtctgatacaaagcgatcac
aatggtcaaattacaagctatggttatgatgtatttggtcgtcgattatacaaacacagc
ctcaatgacgccaaaacagaacatagctcagaacttactttatttggttgggatggtgac
ttgatgatttgggagtcatacaaaaccaactccaatcaagcaaacaaacaagactacacc
aaacactatgtttatgaaccagatagctttgtaccgttattacaaacaggctatacccgt
tttattgaactgatagaaacacctgattatcgtcaattccaagatgtcccttattcgatt
tataaagatccagtgtggaaaacagacacccaaaagaacaaagctgaattggaacgtgtt
gcgttttatcactgtgatcaagtcggtactccgcaaactttaagcaacgagttaggcgag
tgtatttgggaaatcaaacaggatacatggggaacaacacaagaaatcaaaactgcaaat
gaatccaatccacttgagcaaagtaacctaagattccaaggtcaatattacgataaagaa
acaggtttacactataaccgttatcgttattacgaaccgtatagtgcaaggtatgtgagt
aaagacccgattgggttatttggtggattaaataattcggtttatgtaaatgatccaaat
cagtggattgatccgatggggttaaatgaatcactcggaagtgcgatgaaagatgctttt
gtagatagaatacccggttcacaaataccgagtagattaaaaaataaaccgggtgcagtt
caaatgacagatcgagttttaactggtatgaatgcaaatgtcactgctgctgctttagtt
ggagttagtgcttcagcttcatatgatggaaatggaaagtatagtgtgaaaggtggaaat
acatacggaatagcgttggaagcaacaaccactagagaagtattgaatgctggtaattta
aaagatgggaaatattatgaagcatgtgcaagtgcaggtgcaggattagctgtgagtgtt
tgtggaggttattcaatgaatggtggtttttatggaaatattgccttaggtgttgggtta
ggggcatcattaagtggagttagcggagaaaaaagatcatatgaccctttagctccgaaa
acagtagtcgatcacgaacagctaaaaagaaatcaacaaatgcttccacaaggaccttta
aattttggggggttaagataa
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