KEGG   Acinetobacter bereziniae: BSR55_05890
Entry
BSR55_05890       CDS       T06609                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
aber  Acinetobacter bereziniae
Pathway
aber02020  Two-component system
Brite
KEGG Orthology (KO) [BR:aber00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BSR55_05890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aber03021]
    BSR55_05890
Transcription machinery [BR:aber03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BSR55_05890
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 Phage_antitermQ HTH_40 HTH_23 HTH_11 SapB_1 UPF0122 Terminase_5 Card1_endonuc GerE HTH_3 HTH_24 SYN8_N PhyR_sigma-like Sas6_CC
Other DBs
NCBI-ProteinID: ATZ62903
LinkDB
Position
1274860..1275429
AA seq 189 aa
MIIIIICMGLKRVDSIVNKNPAFVDQLYRDHQSWLHQWLRKKMGSSEHAADLVQDTFIKI
LQTRDELFGIKEPRAYLVTIARNLMIDQVRRKRIEQAYLDELGQMEYLLDAIPSPEDQLQ
IIQAIDQICQALASVSEKAQRAFVLHYFEGLTHKEIAEQIGVSTKMIQKYLATCLVQCYV
LKQEKDLFV
NT seq 570 nt   +upstreamnt  +downstreamnt
atgataattattatcatttgtatgggcttaaaacgagttgattctattgtgaacaaaaat
cctgcatttgtagatcaattgtatcgtgatcatcagtcttggttacatcaatggctgaga
aaaaagatgggtagcagtgaacatgcggctgatttggttcaagatacttttatcaagatt
ttacagacgcgtgatgagttgtttgggattaaagagccacgtgcttatttagtcacgatc
gcacgtaatttaatgattgatcaagtccgccgtaaacgcattgaacaagcgtatttggat
gaattaggtcaaatggaatatcttttagatgcgattccttcacctgaagaccaactacag
attattcaagcgattgatcagatttgtcaagcattggcatctgtttctgaaaaagcccaa
cgtgcgtttgttttacattattttgaaggtttgactcataaagagattgccgagcagatt
ggtgtttcaacgaaaatgattcaaaaatatctcgcaacatgcttggtgcaatgttatgtg
ttaaagcaagagaaggatctgtttgtataa

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