Acinetobacter bereziniae: BSR55_05890
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Entry
BSR55_05890 CDS
T06609
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aber
Acinetobacter bereziniae
Pathway
aber02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aber00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSR55_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aber03021
]
BSR55_05890
Transcription machinery [BR:
aber03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSR55_05890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
Phage_antitermQ
HTH_40
HTH_23
HTH_11
SapB_1
UPF0122
Terminase_5
Card1_endonuc
GerE
HTH_3
HTH_24
SYN8_N
PhyR_sigma-like
Sas6_CC
Motif
Other DBs
NCBI-ProteinID:
ATZ62903
LinkDB
All DBs
Position
1274860..1275429
Genome browser
AA seq
189 aa
AA seq
DB search
MIIIIICMGLKRVDSIVNKNPAFVDQLYRDHQSWLHQWLRKKMGSSEHAADLVQDTFIKI
LQTRDELFGIKEPRAYLVTIARNLMIDQVRRKRIEQAYLDELGQMEYLLDAIPSPEDQLQ
IIQAIDQICQALASVSEKAQRAFVLHYFEGLTHKEIAEQIGVSTKMIQKYLATCLVQCYV
LKQEKDLFV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgataattattatcatttgtatgggcttaaaacgagttgattctattgtgaacaaaaat
cctgcatttgtagatcaattgtatcgtgatcatcagtcttggttacatcaatggctgaga
aaaaagatgggtagcagtgaacatgcggctgatttggttcaagatacttttatcaagatt
ttacagacgcgtgatgagttgtttgggattaaagagccacgtgcttatttagtcacgatc
gcacgtaatttaatgattgatcaagtccgccgtaaacgcattgaacaagcgtatttggat
gaattaggtcaaatggaatatcttttagatgcgattccttcacctgaagaccaactacag
attattcaagcgattgatcagatttgtcaagcattggcatctgtttctgaaaaagcccaa
cgtgcgtttgttttacattattttgaaggtttgactcataaagagattgccgagcagatt
ggtgtttcaacgaaaatgattcaaaaatatctcgcaacatgcttggtgcaatgttatgtg
ttaaagcaagagaaggatctgtttgtataa
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