Acinetobacter bereziniae: BSR55_07580
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Entry
BSR55_07580 CDS
T06609
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aber
Acinetobacter bereziniae
Brite
KEGG Orthology (KO) [BR:
aber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aber03021
]
BSR55_07580
Transcription machinery [BR:
aber03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BSR55_07580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATZ63210
LinkDB
All DBs
Position
1614110..1616947
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AA seq
945 aa
AA seq
DB search
MEKLQQFAIGQRWLSDTETELGLGVLIDVDERSISILFPKSDETRVYARNNAPLSRIVFN
VNDEVQDQEGIKWIVESFDDRNGVIRYNVIRTLDNGEQEKKALNETRIGAQIQLSKPLER
LLASQIDYKEWYDLRIEAMQMQANMQTSPLRGLVGARVGLIPHQLYIAHEVGKRFAPRVL
LADEVGLGKTIEAGLIIHQQLKTGRSERILILVPDSLQYQWMIEMRRRFNLNFSLFDLTR
TASIKEHDPELNPFLTEQCIIASVDLMIDHDDLREQAIEAGFDLLVVDEAHHLMWSEEEG
GNDRYDLVEELAEKTEGVLLLTATPEQLGVESHFARLRLLDPQRFSSLDRFLDEEEQYHH
TAKIAEVLMSDLPLEAEHLAAVEKLLGHPIEDQPEHRFRAIHELLDRHGTGRILFRNTRE
AIQGFPGRDCQPAALPAPENWSKDGKLREQMWPEEGQLDGAWMETDPRVTWLMERLRSDL
KHKKVLLIARSGPVVEALENALRIHAGIRTAMFHEGMSLLERDQAAAYFAEDSYGAQILL
CSEIGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLIGTAQERM
FRWYNEALNIFSNISPTAQTLQENFIVDLKECLLADKGQAFEDLLEAVNVQRQALEAELQ
DGRDRLLEYNSCRPIVAQEIVTALEDYDDNTLLPMFMKRFMASTNIDFDEQSNGTVIIKP
TDQMQVQGLDIDEEGMTATFYRDQAQIREDAQYLTLEHPFTESVMEIIRTQSFGSTNVAI
LKTNALKQGTILLEVWFKVDVIAPKALNLPSSLPTQLIRVLLTETGQDITAKLDPEIIKP
YLHHLDSNSCRQVVKARREVIEQRYAQALDIAKGALPQLKEQAKEIYGSKWQYEIDRLSY
LKQFNPSIRTDEIQRLQKFQKEGLGLLDGLSVTPEAIQVLVVVKP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaattgcaacaatttgctataggtcaacgttggttatcggacacagaaactgag
ttaggtttaggtgtattgattgatgtcgatgaacgttcaatcagtattctttttccgaaa
agtgacgaaactcgtgtctatgcacgtaataatgcacctctatctcgtattgttttcaat
gttaatgatgaagttcaagatcaagaagggattaaatggattgtcgaatcctttgatgat
cgcaatggtgtgattcgttataacgtgattcgtaccttggacaatggtgagcaagagaaa
aaggcattgaatgaaacgcgtattggtgcgcaaattcaactatcaaaacctttagagcgc
ttactcgcaagccaaattgattataaggaatggtatgacttgcgtattgaggcaatgcag
atgcaagccaatatgcaaacctctcctttacgtggcttggttggcgcacgagttggattg
attcctcaccaactctatattgcacatgaagtgggtaaacgctttgccccacgtgtgtta
ttggctgatgaagttggtctaggaaaaactattgaagcgggattgatcattcatcaacag
cttaaaacaggtcgttctgaacgtattttgattttggtgccagattcactgcaatatcag
tggatgattgagatgcgtcgccgtttcaatttaaatttctcactgtttgatttgactcgt
acagcttcgatcaaagaacacgatcctgaactcaatccattcttgactgaacaatgtatt
attgcttctgtagacttgatgatcgaccatgatgacttgcgtgaacaagcgattgaagca
ggttttgatttgctggttgtcgatgaagctcatcacttgatgtggagtgaggaagagggt
ggcaacgatcgttacgatttggttgaagagcttgctgaaaagacagaaggtgtattgctt
cttactgcaacacctgagcagttgggtgtagaaagccattttgcgcgtttacgtttactt
gatccacaacgttttagttcacttgatcgcttcttggatgaagaagagcaatatcatcat
actgcgaaaatcgctgaagtattgatgtcggatttacctcttgaagccgagcatttggca
gcagttgaaaaactattgggtcatccaattgaagatcaacctgaacaccgtttccgtgcc
attcatgaacttttagatcgtcatggtacaggtcgtattttattccgtaatacacgagaa
gcgattcaaggtttccctggacgtgattgccagccagcagctttgccagcacctgagaac
tggtctaaagatggtaaattacgtgagcaaatgtggccggaagaaggacagctggatggc
gcatggatggaaactgatccacgtgtaacatggctcatggagcgtttgcgttcagattta
aagcataaaaaagtgttgttgattgcacgtagtggtccagtcgttgaagcgcttgaaaat
gcgttacgtatccatgcagggattcgtacagcaatgttccatgaaggtatgagcttgttg
gaacgtgaccaagctgcggcttactttgctgaagattcttatggtgcacagattttactg
tgttctgaaattggttcggaaggacgtaatttccagtttgcttcggatctgatacttttc
gacttgcctgcaaatcctgatgtattagagcagcgtattggacgtttggatcgtattgga
caagaaaatcgtattcagattcatgtaccttatctgattggtactgcacaagagcgtatg
ttccgttggtataatgaagcactcaatattttcagtaatatttcgccaacagcgcaaacg
ctgcaagaaaactttattgttgatttaaaagaatgtttattggcagataaaggacaggct
ttcgaagacttgcttgaagcggtcaatgtacagcgtcaggcgctggaagcagagttgcaa
gatggtcgtgaccgtctgttagagtacaattcatgccgtccgatcgtggcgcaggagatt
gtcactgcattagaagactatgatgacaacactttattgccgatgttcatgaagcgtttt
atggcatcgaccaatattgatttcgatgagcaaagtaacggtactgttatcattaaaccg
acagaccagatgcaagtgcaaggtttggatattgatgaagaaggcatgactgcgacattc
tatcgtgatcaggcacagattcgtgaagatgcacaatatttaacactggagcatcctttc
actgaaagtgtgatggaaatcattcgtactcaatcttttggcagtaccaatgttgcaatt
cttaaaaccaatgcgcttaaacaagggacgatcttgttagaggtttggtttaaagtagat
gtgattgcaccaaaagctttgaatcttccatcaagtttaccgacgcaattgattcgtgtt
ctattgactgaaacaggtcaggacattaccgcgaagcttgatccagaaatcattaagccg
tatttgcatcatttagatagtaatagctgtcgccaagtggttaaagctcgtcgtgaagtg
attgagcagcgttatgctcaagcgcttgatattgcaaaaggtgcattaccgcaacttaaa
gaacaagcgaaagagatttacggtagtaaatggcaatatgaaattgatcgtttgagctat
ttaaaacaatttaatccaagtattcgtactgatgaaattcaacgtttacagaaatttcag
aaagaaggtttaggtttattggacggtttatctgtaacaccagaagccattcaagtattg
gtcgtggttaaaccttaa
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