Acinetobacter bereziniae: BSR55_13325
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Entry
BSR55_13325 CDS
T06609
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aber
Acinetobacter bereziniae
Pathway
aber03030
DNA replication
aber03430
Mismatch repair
aber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSR55_13325
03430 Mismatch repair
BSR55_13325
03440 Homologous recombination
BSR55_13325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aber03032
]
BSR55_13325
03400 DNA repair and recombination proteins [BR:
aber03400
]
BSR55_13325
Enzymes [BR:
aber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSR55_13325
DNA replication proteins [BR:
aber03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSR55_13325
DNA repair and recombination proteins [BR:
aber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSR55_13325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATZ64276
LinkDB
All DBs
Position
2807798..2811370
Genome browser
AA seq
1190 aa
AA seq
DB search
MQFVHLGIHTEFSITESIVRIPDLIKAAASDEMPALAITDLSNLHAAVKFYNKALGKGIK
PIFGSVIRLNDANHKATLLAMTNKGWRGLTEIVSRGFIEGQQLSIPCIQKQWILEQSEDI
IVLLGLHSDVGEMLCSAYPEKAEPLLEQWIEKFGNRVYLALTRTGRPLEEDFNQEAVKLA
AKYKIGVVAHNDVHFITAEDYEAHEARVCIADGYVLGDNKRPKNYSPEQYFKTSAEMIEL
FADLPSAIENTLQIAKRCTVSLRLGFHDLPDYPIPEGHTIHSYFEHLSEIGLEERLDFLY
PVETRNEDWAEIRKPYDERLAYELGIINKMDFPGYFLIVMDFIQWSKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDIDFCIAGRDKVIDYVARHYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLTLEESIEAEPQLKDI
VTNPSNPDYDDAAEIWEMALKLEGITRNTGKHAGGVVIAPTKITDYSAILCEADGTGRVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKRIQSDQPLNISNIILDDPKAYAVFA
DANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKVEEMVKQRATFIE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPSEFMAAVMSS
EMQNTDNIVFLIDDCRINNLVVLPPSVNMSFYQFYASDATTIIYGLGAIKGVGEQAMQSV
IDSREQDGPYKDLFDFCHRVDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPAKPVKAWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKAFIPHKINELTPTRRGVTTVFAGLVVDVANFPNRMVITLDDGTARIEVSSNHERFQRF
KDIIQNEKVVVIEGEIYEREGFDRPMGRLTKAFTLNEIRQKRANNIAIKLNPEVISKTLA
SDIQKILLPFCNVDMCQHIPIHILLDYDYATADLHFGQQWKVAPLDELLSKLRDYFGKES
IHIEYHVKSKAAKAVDHRELAQTTQVAPPPDNMSMDDAMDEYLADASQYS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatcttggtattcataccgaattttcgattaccgaatcgattgtacgt
atacctgatctgattaaagctgctgcatctgatgaaatgcctgctttagccatcactgac
ctctctaacctgcatgccgcagtcaagttttataataaagcattaggtaaaggcattaag
cctattttcggcagtgtgattcgtctcaatgatgccaaccataaagcaaccctgcttgca
atgaccaataaaggttggcgtggactgacagaaatcgtttctcgaggttttattgaaggt
caacaactttcaattccatgtattcaaaagcaatggatacttgaacaatccgaagatatc
attgttctattaggtctacacagtgatgtaggtgaaatgctctgttcagcatacccagaa
aaagctgaacctttacttgagcagtggattgaaaaatttggcaatcgggtctatttggcg
ctaactcgaacaggtcgtccacttgaagaagacttcaatcaagaagccgttaaacttgcc
gcaaaatataagattggtgtggttgcgcacaatgatgtgcattttatcaccgcagaagat
tatgaagcgcatgaagcgcgtgtctgtattgccgatggatatgtgttaggtgacaataaa
cgtccaaaaaactacagtcctgaacaatattttaaaacatctgctgagatgattgaacta
tttgctgatcttccaagtgctattgaaaatacactgcaaattgcaaaacgttgcacagtc
tctctgcgtttaggcttccatgacctgcctgattatccgattcctgaaggtcacaccatt
cactcctatttcgagcatctgtctgaaattggtttagaagaacgtttagactttctttat
cctgttgaaacacgaaatgaagattgggcggaaattcgtaaaccttatgatgagcgactg
gcttatgagttgggcatcattaacaaaatggatttccctggttattttttaatcgtcatg
gacttcattcaatggtcaaaaaacaatggtgttccagttggtccgggacgtggttcgggt
gcaggctcactggttgcatatagtttaaaaatcaccgacttagatccacttcgttatgat
ctactcttcgaacgcttcttaaatccagaacgggtatccatgcccgactttgatattgat
ttctgtatcgcagggcgagataaagttattgattatgtggcacgccactacggtcgtgat
gctgtatcacaaattgcgacattcggtaccatggcggctaaaggtgcaattcgagatgtc
gctcgagttttaggaaaatcttacggtttggctgatcgtatttccaaaatgattccaaca
aaacctttaggtttaactttagaagaatctattgaagcagaaccccaactcaaagatatc
gtcaccaatccatccaatccagattatgacgatgctgctgaaatttgggaaatggcgctt
aagcttgaaggtattacccgaaatacaggtaaacacgctggtggtgtagtgattgcaccc
accaagattactgattattcagcaatcctctgtgaagctgacggtacgggtcgagttgca
caattcgataaagatgatgtcgaagcggcaggcttagttaaattcgacttcttggggcta
cgtaaccttactgtaattgaagatgcagttcaaaatatcaataagcgaattcaatcggat
caaccattaaacatttcaaatattattttggatgatccaaaagcttatgctgtttttgct
gatgcaaatacaacagcggtgtttcagtttgaatccgtgggcatgaaaaaaatgctcaaa
gaagctcgcccgagtaaatttgaagaaattattgccttcgtttctttatatcgcccaggt
cctatggatctaattcctgactttattcatcgtatgcatggcggtgaatttgaatattta
cacccgctgctcgaaggtgtacttgaaccgacttatgggattatggtctaccaagaacag
gttatgcaagcagcacagttttgtgcaggctataccctcggtggtgcggacttacttcgt
cgtgcaatgggtaaaaagaaagtcgaggaaatggtcaagcaacgtgccaccttcattgaa
ggtgctgcgaaaaaggatattgatgaggctaccgcaaaccatatctttgactatatggaa
aaattcgcaggttatggttttaacaaatcacatgcggcagcctatgctttagttgcctat
caaaccgcttggttaaaagcacattacccttcggagtttatggctgcggtcatgtcttct
gaaatgcaaaatactgataatattgtatttttaattgatgactgtcgaatcaacaattta
gttgtattgcctccatctgtgaatatgtcgttctatcagttctatgccagtgatgcgaca
accattatttatggtttaggtgcaattaaaggtgtcggtgaacaagccatgcagtccgtg
attgactcacgtgaacaagatggtccatacaaagatttatttgatttttgccaccgtgta
gatttgaaaaaaatcaataaacgaaccttggaagccttaatccgtgcaggcgcactagat
tgtttaggtattgaacgttcgagcttaatggctcaacttcccgaagctgttcaagcagca
gaacaagcccgatcaaaccgtgaaacaggcattatggatctgtttggtgaagttgaagaa
gttcaacgtaaaccagccaagcctgtgaaagcgtggtcagatgaggtacgcttaaaaggt
gaaaaagatacgcttggcttatacctgactggtcacccaattgatgtatatcgtcctgag
ttaaaagcatttatccctcataagattaatgaactgacaccaacacgtcgtggtgtaact
acagtgtttgccggcttagtggtcgatgtggctaacttccccaatcgtatggtcatcaca
ttggatgatggtacagctcgtatcgaagtttcctccaatcatgagcgtttccaacgcttt
aaagatatcattcagaatgaaaaagtggtggtgattgaaggtgaaatttatgaacgagaa
ggctttgatcgtccaatggggcgcttaaccaaagcgtttacactgaatgaaattcgtcaa
aaacgtgccaataatattgcgattaaattaaacccagaagtcatcagcaaaaccttagcc
tcagatattcaaaaaattttactgccattttgcaatgtagatatgtgccaacatatccct
atacacattttactggactatgattatgcaacggctgatttgcattttggacaacaatgg
aaagttgcacctttagatgaactcttatcaaaattacgagactattttggtaaggagtcg
attcatattgaataccatgtcaaatctaaggcggctaaggcagttgaccatcgtgaattg
gcacaaactactcaagttgcaccacctccagacaatatgagcatggatgatgcaatggat
gagtatctcgctgatgcaagtcaatactcctaa
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