Acinetobacter bereziniae: BSR55_17440
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Entry
BSR55_17440 CDS
T06609
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aber
Acinetobacter bereziniae
Pathway
aber02020
Two-component system
aber02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aber00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSR55_17440
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSR55_17440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aber03021
]
BSR55_17440
Transcription machinery [BR:
aber03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSR55_17440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DNA_pol3_a_NI
IL7
Ribonuc_red_lgC
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ATZ64992
LinkDB
All DBs
Position
complement(3712934..3714382)
Genome browser
AA seq
482 aa
AA seq
DB search
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEEETHESLES
AQQEQQEYELSDALNANHLPDELPVDTDWDDVYTHQSTAIERPEFEDREDNRHSNASLKE
HMLGQVNLLHFSPVDRLIAYCIVDALDEKGFLEADIDEIVSSVQHLLQQMDYDIEVEEDE
VLVVLKHIQRLEPIGIGARNLAECLFVQIEALPITTLFRKEALMLLKHYELLVSNDLNKL
IKQTGLNAESLKSAIELLKTMKPYPGAEFEQKESDYQIPDVVVSKKNNHWHVQLNPDVLP
KLRINSFYSGMIKRADQSDENQYLRNQMLEAKNFIKSVDERHKTLLKVASCIVQHQREFL
EIGAEGMKPLVLRDVAEEVELHESTVSRVTTNKFLLTPLGLFELKYFFSSHVGTTSGGEA
SSTAIRAKIKKLVADENPRKPLSDNTIANLLKEDGIDVARRTVAKYRESLHIPSSSDRKV
LI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcggttggattaaaagttgcaaactcgttgtcgcttacgccacaactgcaa
caagccattcgattactacaattatcgagcttagaacttgaacaggaaattcaaattcaa
ctggacagtaatcctttgcttgaaaaagttgaagaagaaacacatgaaagtttggaaagt
gcacaacaagaacaacaagagtatgaactttcagatgctttaaatgccaatcatttgcct
gacgagttacctgttgataccgattgggatgatgtatatacccatcaatctactgcaatt
gagcgtccagagtttgaagaccgtgaagacaatcgccattccaatgcatcattaaaagag
catatgctgggacaagtgaatttgttgcatttttccccagtcgataggttaattgcgtat
tgcattgtggatgccttggatgaaaaaggttttttggaggcggatatcgatgaaatcgtc
agttctgttcaacatttgctacaacaaatggactatgacattgaagtagaagaagacgag
gttttggttgtcttaaagcatattcaacggcttgaaccgataggtattggagcacgaaat
cttgcagaatgtctttttgtgcaaatcgaggctctccctataacgactttgtttaggaaa
gaagccttgatgttattaaaacattatgagcttttggtcagtaatgatctcaataaattg
attaagcaaacgggattaaatgctgaatcattgaaatcagcaattgaattgctcaaaacc
atgaagccatatcctggggcagagtttgagcaaaaagaatcagattaccaaattcctgat
gtagtggtttccaaaaagaataatcactggcatgttcagctgaatccagatgttttgcct
aagttgagaatcaactctttttattcaggcatgatcaaacgtgcagatcaaagtgatgag
aatcagtatttacgtaatcaaatgctggaagctaaaaactttatcaaaagtgtcgatgag
cgccataaaacattattaaaagtcgccagttgtatcgtacagcatcaacgtgaattctta
gaaattggcgcagaaggtatgaagcctttggtgttgagagatgtggctgaagaagttgaa
ttacacgaatcaacagtgtcgcgagtcaccacgaataagtttttactcacaccattgggt
ttgtttgagttgaaatatttcttttcaagccatgtaggaacgacttcgggtggtgaagca
tcatcaacagcaattcgtgccaaaattaaaaaactggtggcggatgaaaatcctcgtaaa
ccattgtctgataatacgattgctaatttgttaaaagaggatggaatcgatgttgcacga
cgtacggtcgcaaaatatcgcgaatcgttacatattccatcgtcatcagacagaaaggtc
ttgatctag
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integrated database retrieval system
