Aeromonas bestiarum: IU367_03050
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Entry
IU367_03050 CDS
T08822
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abes
Aeromonas bestiarum
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abes03009
]
IU367_03050 (rlmD)
Enzymes [BR:
abes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IU367_03050 (rlmD)
Ribosome biogenesis [BR:
abes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IU367_03050 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_15
PrmA
PCMT
Methyltransf_11
TRM5-TYW2_MTfase
N6_Mtase
RrnaAD
UPF0020
Methyltrans_SAM
AKAP7_NLS
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
WDL83206
LinkDB
All DBs
Position
629228..630580
Genome browser
AA seq
450 aa
AA seq
DB search
MPLVGHQHQIEILELTDKGDGKGRLFDRPLFVEGLLPGEQALVELTEVKPNYLHGKLTEL
LQPSADRVADFCPNTECGGCQVRPLAYPAQLKLKQALVQSALEQVGLGDTTVNPILGMES
PFAYRNKAQYAVRGCEAGAEIGFYRKHSHDLITADDCAVQDSLHVELNARVRGWMREHDI
AAYDEVNHTGCVRNLMTRKGFKSGELMVVLVTLGETLPFEAELLASLSDLPITTLVQNIN
DERTNRILGASNRVLLGEGVIRDKIHELEFEISPLSFFQNNPTQTDVLYSSALEYAELTG
NETVFDIYCGIGTISLFLAGKAAKVVGIESVESAISDARRNAALNGIEHTEFHVGKAEQL
MPELHAQGVTADVVVLDPPRKGCDKAVLQTLVAMAPRRLVYVSCNPQTLARDLAWLVKQG
FVLDEVQPVDMFPHSMHVEAVARLSLPAKG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccgttagtgggacatcaacaccagatcgagatcctggaactgaccgacaaaggggat
ggcaagggacgcctgttcgatcgccccctgtttgtcgagggtctgctgcccggtgagcag
gcgctggttgagctgaccgaggtcaagccgaactatctgcatggcaagctgaccgagctg
ctccagccgtctgccgatcgggtcgccgatttctgccccaacacagagtgcggtggctgc
caggtgcgcccgctggcctacccggcccagctcaagctcaagcaggcactggtgcagagc
gcactggaacaggtcgggctgggtgacaccacagtcaaccccatcctcggcatggagagc
ccgttcgcctatcgcaacaaggcgcaatatgcggtgcgtggctgtgaggccggcgccgag
attggtttttatcgcaagcactcccacgatctcatcacagcggacgattgcgccgtgcag
gactcgctgcacgtggagctcaacgcccgggtacgtggctggatgcgcgagcatgacatc
gccgcctatgacgaagtgaatcacaccggctgcgtgcgcaacctgatgacccgcaagggc
ttcaagagcggcgagctgatggtggtgctggtgaccctgggtgaaacactgccgttcgaa
gccgagctgctggcgagcttgagcgatctgcccatcaccaccctggtgcagaacatcaac
gatgagcgcaccaaccgcattctgggtgcgagcaaccgggtgctgctgggtgaaggggtg
atccgcgacaagatccatgagctcgagttcgagatctcgccgctctccttcttccagaac
aacccgacccagaccgatgtgctctactccagcgccctcgagtatgccgagctgaccggc
aacgagactgtgttcgacatctattgcggtatcggcaccatctccctgttcctggctggc
aaggccgccaaggtggtggggatagaatcggtggagagcgccatcagcgacgcccgtcgc
aacgcggccctcaacggcatagagcacaccgaattccacgtgggcaaggccgagcagctg
atgcccgagctgcacgcccagggcgtgaccgccgacgtggtggtgctggatccgcctcgc
aagggttgtgacaaggcggtattgcagaccctggttgccatggcaccgcgccgtctggtc
tatgtctcctgtaacccgcagaccctggcccgcgatctcgcctggctggtcaagcagggc
ttcgtactggatgaagtgcagccggtcgacatgttcccgcattccatgcatgtggaagcg
gttgcccgcctgagcctgcctgccaagggctga
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