Aeromonas bestiarum: IU367_04890
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Entry
IU367_04890 CDS
T08822
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
abes
Aeromonas bestiarum
Pathway
abes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IU367_04890 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abes03019
]
IU367_04890 (pnp)
03016 Transfer RNA biogenesis [BR:
abes03016
]
IU367_04890 (pnp)
Enzymes [BR:
abes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IU367_04890 (pnp)
Messenger RNA biogenesis [BR:
abes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IU367_04890 (pnp)
Transfer RNA biogenesis [BR:
abes03016
]
Prokaryotic type
tRNA degradation factors
IU367_04890 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
CsrA
OB_RRP5_4th
KH_SLS1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WDL83539
LinkDB
All DBs
Position
996162..998303
Genome browser
AA seq
713 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PLVSPDIVAMIGASAALAISGIPFGGPIAAARVGYMNGQYVLNPTTAELPQSDLDLVVAG
TANAVLMVESEAAILSEETMLGAVVYGHEQMQVVINAINEFAAEVGTQPWDWTPPATNEA
LKAKVAELATAELGEAYRITEKAVRYAAIGAIKSRVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVGTGILPRAHGSALFTRGETQAIVVATLGTERD
AQNIDELAGHRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTQGITALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRSEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADFLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAPVADVAVAEEPTAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccggt
gtgatggcccgtcaagccactgcggccgtaatggtcagcatggacgatacctgcgtattt
gtgaccgtagtaggcaagaaagaggccgatcacggtcgcgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgaaaccctcacctcccgcctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtcatgtccgtgaac
ccgctggtttccccggacatagttgccatgatcggtgcctctgctgcactggccatctcc
ggcatcccgttcggtggcccgattgccgcggctcgcgtgggttacatgaacggtcagtac
gtgctgaacccgactacagccgaactgccccagagcgatctggacctggtagttgccggt
accgccaacgcggtactgatggtcgaatccgaagcggccatcctgtctgaagagaccatg
ctgggcgccgtcgtttatggccacgagcagatgcaagtcgtgatcaacgccatcaacgaa
ttcgccgccgaggtgggtacccagccgtgggattggaccccgcctgcgaccaacgaagcg
ctgaaagccaaggttgccgagctggccaccgccgagctgggtgaagcctaccgcatcacc
gagaaggccgtgcgttacgccgccatcggtgccatcaagtcccgtgtggttgagcaagtg
atcgcctccggtgtggaagaagatgccaagaagatcggcgaagagttccacagcctggaa
agccgcatcgtccgtggccgtgtggtccgtggcgagccgcgcatcgatggtcgcgatccg
gaaatgatccgcgccctgtccgtcggcaccggcattctgccgcgcgctcacggctccgcc
ctgttcacccgtggtgagactcaggccatcgtggtagcgaccctgggtaccgagcgtgac
gcccagaacatcgacgagctggctggccaccgtgccgaccgcttcatgctgcactacaac
ttcccgccgtactgcgtcggtgagaccggcatgatgggtagcccgaagcgtcgtgaaatc
ggtcacggtcgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgccgagttc
ccgtacgtggtgcgcgtggtgtctgaaatcaccgaatccaacggttcctcctccatggcc
tccgtctgtggttcctccctggcgctgatggacgcgggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatc
ctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtactactcaaggt
atcacagcgctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gccctcaagcaagcccgtggtgctcgcctgcacatcctgaaagtgatggacgaagccatc
caggcgccgcgtagcgaaatctccgacttcgccccgcgcatccacaccatcaagatcaat
cctgagaagatcaaggacgtgatcggcaagggtggttccgtgatccgcgcgctgaccgaa
gagactggcaccaacatagagctggatgatgacggtaccgtccgcatctccgccgttgcc
aacgaagccgccatggaagccattcgtcgcatcgaggccatcaccgccgagatcgaagtg
aaccgcatctatgaaggcaaggttgtgcgtctggccgacttcggcgccttcgtcaatatc
ctgccgggtaaagacggtctggtacacatctcccaaatcaccgatgcccgagtgcaaaac
gtggccgacttcctgaagatcggtgatgttgtgaaggtgaaggtactggaagtggaccgt
caaggccgcgtgcgtctctccatcaaggaagcgaatgcaccgaccgaagccgccgcaccg
gttgctgacgtggctgttgccgaagagccgactgccgaataa
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