Aeromonas bestiarum: IU367_12200
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Entry
IU367_12200 CDS
T08822
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
abes
Aeromonas bestiarum
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abes03032
]
IU367_12200 (hupB)
03036 Chromosome and associated proteins [BR:
abes03036
]
IU367_12200 (hupB)
03400 DNA repair and recombination proteins [BR:
abes03400
]
IU367_12200 (hupB)
DNA replication proteins [BR:
abes03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IU367_12200 (hupB)
Chromosome and associated proteins [BR:
abes03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IU367_12200 (hupB)
DNA repair and recombination proteins [BR:
abes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IU367_12200 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HVO_A0261_N
HU-DNA_bdg
DUF7205
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WDL80861
LinkDB
All DBs
Position
complement(2635811..2636083)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIADGADISKAAAGRALDAFIDAVGEALKEGDQVALVGFGTFAVRERAARSG
RNPQTGATIEIAAGKVPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgattgacaagattgcagacggtgctgatatctccaaagccgct
gctggccgtgcgctggatgctttcattgacgccgttggtgaagccctgaaagagggtgac
caggttgctctggtgggtttcggtactttcgccgtgcgcgagcgtgctgcccgttctggc
cgtaacccgcaaactggcgcgaccatcgaaatcgccgctggtaaagttcctgccttcaaa
gccggtaaggccctgaaagacgctgtcaactaa
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