Aeromonas bestiarum: IU367_17655
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Entry
IU367_17655 CDS
T08822
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abes
Aeromonas bestiarum
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abes03009
]
IU367_17655 (rlmD)
Enzymes [BR:
abes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IU367_17655 (rlmD)
Ribosome biogenesis [BR:
abes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IU367_17655 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_11
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
RrnaAD
PCMT
Methyltransf_15
Methyltransf_12
Methyltransf_23
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_4
PrmA
DOT1
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
WDL81889
LinkDB
All DBs
Position
complement(3862825..3864144)
Genome browser
AA seq
439 aa
AA seq
DB search
MAQFFKPQKKSTQPQRIEFTVDSLDHHCVGIGRHQGKAIFIEGALPGEQVKARILEDKKQ
YAHAALQQVVTPAANRIAPFCSHYRECGGCNAQHLGEADQQAAKEAGLVSLFERLGQIKA
PALEPVLTGESRAYRRVCRLAIKFDKNGRCTRVGFRRRQSNDLVEIEGCPVLAEPLSALI
APLRECLNRLKSQRELGHAELIQAEQGIMMLLRHTGRPNEGDRALLVAFAQAQGIDLYLQ
AADERIEPLHQVFQPSYSLDGLSLAFAPGDFIQVNGPINQSMVAQALAWLGASKDDKVLD
LFCGIGNFTLPLARQAREVVGVEGELAMVARAEENARRNGIDNARFYKADLSGDIVGMSW
AREGFDLVLLDPARPGALEVMGHVVKLSPKRVVYVSCNPVTLARDSQVLVKGGYRLVRLG
MLDMFPHTGHLESMALFER
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtttttcaagccccaaaagaaatccacccagccccaacgtattgaatttacg
gtagacagtctggatcaccactgcgtcggtatcggccgtcatcagggcaaggcgatcttc
attgaaggggcgctgcccggcgagcaggtcaaggcccgcatcctcgaagacaagaagcag
tatgcccacgccgccttgcaacaggtggtgaccccggcagccaatcgcatcgcccccttc
tgcagccactaccgcgagtgcggcggttgcaatgcccagcatctcggtgaggcggatcag
caggccgccaaggaggccggtttggtcagcctgttcgagcggctggggcagatcaaggcg
ccagcgctggagcccgtgctgacaggggagtctcgcgcctaccgccgggtctgccggctg
gccataaagtttgacaagaatggccgctgcacccgggtcggttttcgtcgtcgccaatcc
aacgacctggtggagatcgagggctgccccgtgctggccgagccgctctctgccctcata
gcgccgctgcgcgaatgcctcaatcgcctcaagagccagcgtgagctgggccatgccgaa
ctcattcaggccgagcaggggatcatgatgctgctgcgccatacgggtcgtcccaacgag
ggggatcgcgccctgctggtggcctttgcgcaggcgcaggggatagacctctatctgcag
gccgccgatgaacgcatcgagccgttgcatcaggtattccagccatcctactcactggat
ggcctgtctcttgcatttgctcctggtgacttcattcaggtcaatggccccatcaaccag
agcatggtggctcaggcgctggcgtggctcggggcgagcaaggatgacaaggtgctggat
ctgttctgcggcataggcaacttcaccctgccactggcccgtcaggcccgggaagtggtg
ggcgtggaaggggagctggccatggtggcccgcgcggaggagaacgcccgtcgcaacggc
atcgacaatgcccgtttctacaaggcggacttgagcggtgacatagttggcatgtcctgg
gcgcgggaagggttcgatctggtgctgctggatccggcccgccccggtgcgctggaggtg
atgggtcacgtcgtgaaactttcacccaagcgagtggtctacgtttcctgtaacccggtc
accctggcccgtgacagccaggtgctggtgaaagggggctaccgactggtacgtctgggg
atgctcgacatgttcccccacaccggccatctggagtccatggccctgtttgagcggtaa
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