Aeromonas bestiarum: IU367_20345
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Entry
IU367_20345 CDS
T08822
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abes
Aeromonas bestiarum
Pathway
abes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IU367_20345 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abes03021
]
IU367_20345 (rpoC)
03400 DNA repair and recombination proteins [BR:
abes03400
]
IU367_20345 (rpoC)
Enzymes [BR:
abes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IU367_20345 (rpoC)
Transcription machinery [BR:
abes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IU367_20345 (rpoC)
DNA repair and recombination proteins [BR:
abes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IU367_20345 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WDL82372
LinkDB
All DBs
Position
complement(4410407..4414711)
Genome browser
AA seq
1434 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDSIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIEPGMTNLERSQMLSEENYLDALEEWGDEFDAKM
GAEAILALLRAIDLEGEVKTMREELDQTNSETKRKKTTKRLKLMEAFLQSGNKPEWMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIYGKLESRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRARINAKGEGMVLAGPKEAEKVYRAG
LADLHARVKVRITEYLRQEDDSLVERTEMKNTTVGRAILSLILPKGMEYALIDEPKVLTA
AEQADLDANPQNWIKSVSNKALGKKLISRLLNTCYRKQGLKDTVIFADQLMYTGFHYAAL
SGASVGIDDMVIPDAKKDIIAAAEAEVAEIQDQFLSGLVTAGERYNKVIDIWASANERVS
KAMMENLSKERDVNSLGEEEEQASFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSI
IETPIVANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDMVITEDDC
GTIEGLWMTPLIEGGDVVEPLRERVLGRVVADDVIKPGTEDEILVARNTLLDEQLCDLLE
QNSVDRVKVRSAITCETDFGNCAHCYGRDLARGHLVNKGEAVGVIAAQSIGEPGTQLTMR
TFHIGGAASRAAAENSIQVKNTGTIKLQNAKFVHNSDDKLVITSRSTELTIMDDMGRTKE
SHKLPYGAVLEVKDTQAVSAGDTVANWDPHTHPIITEVAGRLQFEHMIDGVTITRQTDEL
TGLSSIVVLDVNERPSAGKEMRPTVKLVDLNGKDVMIPGTDVAAQYFLPGKAIVNLEDGA
NVGVGDAVARIPQESSGTKDITGGLPRVADLFEARQPKEPAILAEISGTISFGKETKGKR
RLVITPTDGGDVYEEMIPKWRNLNVFEGEKVEKGEVLADGPESAHDILRLRGISPVANYI
ANEVQDVYRLQGVKINDKHIEVIVRQMLRKCEILSAGDTDLIEGEQVEVARVKIANRKLV
AEGKAPATFRHILMGITKASLSTESFISAASFQETTRVLTEAAVGGKRDELRGLKENVIV
GRLIPAGTGFAYHHSRINQRAAAARAVGVPQVTADEAQQNLADLLNASGSFDEE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttactcaagtttttgaaggctcagaccaagaccgaagagtttgacagtatc
aagatcggtctggcctctcctgacatgatccgctcctggtcattcggtgaggtcaaaaag
cctgagaccatcaactaccggactttcaagccggaacgtgatggtctgttctgcgcccgt
atcttcggaccggtgaaggactacgagtgtctgtgcggcaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgtagaagtgacccagaccaaggtccgtcgcgag
cgtatgggccacatcgagctggccagcccgactgcccacatctggttcctgaagtccctg
ccgtcccgtatcggtctgctgctggacatgaccctgcgtgacatcgagcgcgtgctgtat
ttcgaatcctatgtagtgatcgagcccggcatgaccaacctcgagcgcagccagatgctg
tccgaagagaactatctggacgcactggaagagtggggcgacgaattcgacgccaagatg
ggtgccgaagcaatccttgcattgctgcgagccatcgatctggaaggcgaagtcaagacc
atgcgtgaggagctggatcagaccaactccgaaaccaagcgcaagaagaccaccaagcgc
ctgaagctgatggaagccttcctgcagtccggcaacaagccggagtggatgatcatgaca
gtgctgcctgtgctgccgccggacctgcgtccgctggtaccgctggacggcggccgtttc
gcgacttccgatctgaacgatctgtaccgtcgtgtgatcaaccgtaacaaccgtttgaag
cgcctgctggacctggctgccccggacatcattgtgcgcaacgaaaagcgcatgctgcaa
gagtccgtggatgccctgctggacaacggccgtcgtggccgtgccatcacaggttccaac
aagcgtccgctgaaatccttggccgatatgatcaagggtaagcaaggtcgtttccgtcag
aacctgctgggtaagcgtgtcgactactctggtcgttccgttatcaccgtaggcccgacg
ctgcgtctgcatcagtgcggtctgccgaagaagatggcgctggagctgttcaagccgttc
atctatggcaagctggaatcccgcggtctggcgaccactatcaaggccgccaagaagatg
gtggagcgtgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg
gtcctgctgaaccgtgcaccgaccctgcaccgtctgggtatccaggcgtttgaaccgacc
ctgatcgaaggcaaggccatccagctgcacccgctcgtctgtgccgcctataacgcggac
ttcgatggtgaccagatggcggtccacgtaccgctgaccctggaagcccagctcgaagcg
cgcgccctgatgatgtccaccaacaacatcctgtcgccagcctccggtgagccgatcata
gttccttcccaggacgtggtcttgggtctgtactacatgacccgtgcccgtatcaacgcc
aagggcgaaggtatggtgctggccggcccgaaagaagccgagaaggtatatcgcgccggt
ctggccgatctgcatgctcgcgtcaaagtgcgtatcaccgaatatctccgtcaggaagat
gattcgctggtagagcgtaccgagatgaagaacaccaccgttggtcgtgcgatcctgagc
ctgatcctgccgaaaggcatggaatacgccctgatcgacgagcccaaggtgctgactgct
gcagagcaggctgatctggatgccaatccgcagaactggatcaagtccgtatccaacaag
gcgctgggcaaaaagctcatctcccgtctgctgaacacctgctatcgcaagcagggcctg
aaggacaccgttatcttcgctgaccagctgatgtataccggtttccattatgcggccctg
tccggtgcttccgttggtatcgatgacatggtcatcccggatgccaagaaagacatcata
gccgcagccgaagccgaagttgccgagatccaggaccagttcctgtccggcctggtgacc
gcgggcgagcgctacaacaaggttatcgatatctgggccagcgccaacgagcgcgtctcc
aaggccatgatggagaacttgtccaaagagcgtgatgtcaactcgctgggtgaagaagaa
gagcaggcgtcgttcaacagcatcttcatgatggccgactctggtgcgcggggttctgca
gcccagatccgtcagctggccggtatgcgtggcctgatggccaagccggatggctccatc
atcgagaccccgatcgtcgcgaacttccgcgaaggtctgaacgtactgcagtacttcatc
tccactcacggtgcccgtaagggtctggcggataccgcactgaagacggctaactccggt
tacctgactcgtcgtctggttgacgtggcacaggacatggtgatcaccgaggacgattgc
ggcactatcgaaggtctgtggatgactccgctgatcgaaggtggtgacgtggtcgagccg
ctgcgtgagcgtgtgctgggccgtgtggttgccgatgacgtgatcaagccgggtaccgag
gacgagatcctggtagcgcgcaacaccctgctcgacgagcagctgtgtgacctgctggaa
caaaactctgttgaccgcgtgaaggtgcgttctgccatcacctgtgaaactgacttcggt
aactgtgctcactgctacggccgtgatctggcccgtggtcacctggtgaacaagggtgag
gctgtcggtgttatcgccgcccagtccatcggtgaaccgggtacccagctgacgatgcgt
accttccacatcggtggtgccgcatcccgagccgctgccgagaacagcatccaggtgaag
aataccggtaccatcaagctgcagaacgccaagttcgttcacaacagcgatgacaaactg
gttatcacctcccgttctaccgaactgaccatcatggatgacatgggccgtaccaaggaa
agccacaagctgccttacggtgccgtgttggaagtgaaggatactcaggccgtgagcgcc
ggtgacactgtcgccaactgggatccgcacacccacccgatcatcaccgaagtggcgggt
cgcctccagttcgaacacatgatcgatggcgtgaccatcactcgtcagaccgacgaactg
accggtctctcttctatcgtcgtactggatgtcaacgagcgtccgagtgccggtaaagag
atgcgtccgaccgttaaactggtcgacctgaacggcaaagatgtcatgatcccgggtacc
gatgtcgccgcccagtacttcctgccgggcaaggcaatcgtgaacctggaagatggtgcc
aacgtgggtgtgggtgacgcggtagcgcgtatcccgcaagaatccagtggtaccaaggac
atcaccggtggtctgccgcgcgttgcggatctgttcgaagcacgtcaaccgaaggaacct
gccatcctggccgagatctccggtaccatctccttcgggaaagagaccaagggcaaacgc
cgtctggtcatcaccccgaccgatggtggcgatgtctacgaggagatgattccgaagtgg
cgtaacctgaacgtgttcgaaggtgaaaaagttgagaagggtgaagtgctggcggacggt
cctgagtctgctcacgacatcctgcgtctgcgcggtatcagcccggttgccaactacatc
gccaacgaagtgcaggacgtttaccgtctgcaaggcgttaagatcaacgacaagcacatc
gaagtcatcgttcgtcagatgctgcgcaagtgcgagatcctgagcgctggcgacactgac
ctgatcgaaggcgagcaggttgaagtggcccgtgtgaagattgccaaccgtaagctggtt
gcagagggcaaggccccggctaccttccgtcatattctgatgggtattaccaaggcatct
ctgagcacagagtccttcatctccgcggcttccttccaggaaaccactcgtgttctgacc
gaagcggccgttggcggcaagcgtgatgaactgcgtggcctgaaagagaacgtgatcgtg
ggtcgtctgatcccggctggtaccggctttgcctaccaccatagccggatcaaccagcgt
gccgccgcagctcgtgctgtcggtgtaccgcaggtgactgccgatgaagctcagcaaaac
ctggcggatctgctcaacgcatccggcagttttgacgaagagtaa
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integrated database retrieval system
