Aeromonas bestiarum: IU367_21200
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Entry
IU367_21200 CDS
T08822
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
abes
Aeromonas bestiarum
Pathway
abes00541
Biosynthesis of various nucleotide sugars
abes01100
Metabolic pathways
abes01250
Biosynthesis of nucleotide sugars
Module
abes_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IU367_21200 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
abes01005
]
IU367_21200 (rfaD)
Enzymes [BR:
abes01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IU367_21200 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
abes01005
]
Core region
IU367_21200 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
WDL82535
LinkDB
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Position
complement(4600574..4601530)
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AA seq
318 aa
AA seq
DB search
MIVVTGGAGFIGSNLVKQLNAQGRTDIVVIDDLTDGTKFVNLVDLTIADYMDKDEFQARI
VSGDEFEEWDDGIEVIFHEGACSATTEWNGKFIMEVNYEYSKDLFHYCIEREIPFIYASS
AATYGGRNDNFIEDPKFEQPLNVYGYSKQLFDQYVRRWMPEINSQVVGLKYFNVYGPREQ
HKGSMASVAFHLNTQVKKGENPKLFEGCDGFPNGGQMRDFIYVDDVCKVNLWFWQNPQHS
GIFNCGTGRAEPFQNVAEAVIQHHQKGAIEYIPFPDHLKGRYQSFTQADMTRLRGVGYDA
EFKTVAEGVADYMAWLNR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagtaactggcggtgctggctttatcggcagcaatctggtcaagcagctgaac
gctcaaggacggaccgatatcgtggtcatcgatgacctgaccgacggcaccaagttcgtc
aacctggtcgatctgaccattgccgattacatggataaggacgagttccaggcgcggatc
gtctccggtgacgagtttgaagagtgggacgacggcatcgaggttatcttccacgaaggt
gcctgctccgcgaccaccgagtggaacggcaagttcatcatggaggtcaactacgagtac
tccaaggatctgttccactactgcatcgagcgggaaattccgttcatctacgcctcttcc
gctgcgacctacggtggccgcaacgacaacttcatcgaagatcccaagttcgagcagcca
ctcaacgtctatggctactccaagcagctgttcgaccagtacgtgcgccgctggatgccg
gagataaactcccaggtcgtgggtctgaagtacttcaacgtctacggtccacgcgagcag
cacaagggctccatggcttccgtcgccttccacctcaatactcaggtgaagaagggcgag
aatcccaagctgttcgaaggctgtgacggtttcccaaacggtggccagatgcgtgacttc
atctatgtggatgacgtctgcaaggtgaacctctggttctggcagaacccgcagcactcc
ggcatcttcaactgcggtaccggtcgtgccgagccgttccagaacgtggccgaagccgtt
atccagcatcatcagaaaggggccatcgagtacattcccttcccggatcacctcaagggt
cgctatcagagcttcacccaggcagacatgaccaggctgcgcggtgtcggttatgacgcc
gagttcaagacagtggccgaaggcgtggccgactacatggcctggctcaaccgctaa
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