Aeromonas bestiarum: IU367_21510
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Entry
IU367_21510 CDS
T08822
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
abes
Aeromonas bestiarum
Pathway
abes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IU367_21510 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abes03019
]
IU367_21510 (rhlB)
Enzymes [BR:
abes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IU367_21510 (rhlB)
Messenger RNA biogenesis [BR:
abes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IU367_21510 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WDL82590
LinkDB
All DBs
Position
4667396..4668685
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
IAFLAATFNYLLTHPLTNPRLVNQPRAIIMAPTRELAVQIYNDADSIAASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQVEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
DFTKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVVRNRQPVNRNMRDRQGGGNSN
NRRRPPRKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacgaccgaaaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacgcccatccaggcactgtctctg
ccactgctggtagaaggccatgacctcgccggtcaggcccagacaggaaccggcaagacc
attgccttcctggccgcgacattcaactatttgctgacccacccgctgaccaatccccgt
ctggttaaccaacccagagccatcataatggcacccacccgggaactggcagtacagatc
tacaacgatgccgacagcatagccgcctctaccggcctcaagcttggcctcgcctacggc
ggcgaaggttacgacaagcagctggccgtgctggagcagggcgtcgacatcctgatcggc
accacgggccgcatcatcgactacttcaagtccaaggtcatcgatctgagcaacatccag
gtcgtggtactggacgaagcggatcgcatgttcgatctcggcttcatcaaggacatccgt
ttcctgttccgccgcatgccggcgccgaccgagcggctgagcatgctgttctccgccacc
ctctccctgcgggtgcaggagctggcctacgagcacatgaaccacccggaacacgtgcag
gtggagcctgagcagatgacgggcgtgcgcatcaaggaggagctgttctacccctccaac
gaagacaagatgctgctgttgctctccctgatggaagaagagtggccggaaaaggccatc
gtcttcgccaacaccaagcatgtctgtgaagacgtacatgcgtggctggagaatgacggc
caccgcgtcggtctgctgaccggtgacgtgccgcagaagaagcggatgaaaatcctagaa
gacttcaccaaggggacgctggacatcctggtcgccaccgacgtggccgcccgtggtctg
cacatcccggacgtgacccacgtcttcaactacgacctgcccgacgacgccgaggactat
gtacaccgtatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccaccacccgatcccg
gtcagcaagtatgatcgcgaggcgctgctggatgacgtgaccgcaccgaaacgggtcgtt
cgcaaccgtcagccggtgaaccgcaacatgcgggatcgccagggcggtggcaacagcaac
aaccgtcgtcgtccgccgcgcaagagctga
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