Azospirillum brasilense Sp 7: AMK58_00450
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Entry
AMK58_00450 CDS
T04566
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
abf
Azospirillum brasilense Sp 7
Pathway
abf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMK58_00450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abf03021
]
AMK58_00450
03019 Messenger RNA biogenesis [BR:
abf03019
]
AMK58_00450
Transcription machinery [BR:
abf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AMK58_00450
Messenger RNA biogenesis [BR:
abf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMK58_00450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
ALJ34006
UniProt:
A0A560CHF0
LinkDB
All DBs
Position
95848..97104
Genome browser
AA seq
418 aa
AA seq
DB search
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDVPIYGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFSLRTGDTVEGQIRAPKDGERYFALLKVNTIN
FDAPDKVRHRINFDNLTPLYPEERLRMEVDDPTKKNYTGRIIDLVAPLGKGQRGLIVAPP
RTGKTVMLQNIAHSIATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTISKMWILRRILMPMGVTDAVDFLVDKLKHTKSNSEFFESMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaagagctgaagtgcaagagccccgccgaactgctggcgttcgcggaggaa
ctgcagatcgagaacgccagcacgctgcgcaagcaggacatgatgttcgccatcctcaag
cagctggcggaaaacgatgtcccgatctacggcgacggcgtgctcgaggttcttcaggac
ggcttcgggttcctgcgctcgccggaggccaattatcttcccggccccgacgacatctac
gtcagccccagccaggtgcgccgcttcagcctgcgcaccggcgacacggtcgaggggcag
atccgcgcgcccaaggatggcgagcgctacttcgcccttctcaaggtcaacacgatcaac
ttcgatgcgccggacaaggtccgccaccgcatcaacttcgacaacctgaccccgctctat
ccggaagagcggctgcgcatggaagtcgacgacccgaccaagaagaactacacgggccgc
atcatcgacctcgtggcgccgctgggcaagggccagcgcgggctgatcgtcgccccgccg
cgcacgggtaagaccgtgatgctgcagaacatcgcccattccatcgcgaccaaccacccg
gaagcctatctgatcgtcctgctgatcgacgagcgtccggaagaggtgaccgacatggcc
cgctccgtgcggggcgaggtcatcagctccaccttcgacgagccggcgacccgccacgtt
caggtcgccgagatggtcatcgagaaggccaagcggctggtcgagcacaagcgcgacgtg
gtcatcctgctggactccatcacccgtctggcccgcgcctacaacaccgtcgttccctcc
tcgggcaaggtgctgaccggcggcgtggacgccaacgcgctgcagcgcccgaagcgcttc
ttcggtgcggcccgcaacatcgaggagggcggctcgctgaccatcatcgcgaccgcgctg
atcgacaccggcagccgcatggacgaggtgatcttcgaagagttcaagggcacgggcaac
tcggagatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgacatc
tccaagtcgggcacccgcaaggaggagctgctggtcgacaagggcaccatctcgaagatg
tggatcctgcgccgcatcctgatgccgatgggcgtgaccgacgcggtggacttcctggtc
gataagctgaagcacaccaagtcgaactcggaattcttcgaatccatgaaccagtag
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