Azospirillum brasilense Sp 7: AMK58_06250
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Entry
AMK58_06250 CDS
T04566
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abf
Azospirillum brasilense Sp 7
Pathway
abf03030
DNA replication
abf03430
Mismatch repair
abf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMK58_06250
03430 Mismatch repair
AMK58_06250
03440 Homologous recombination
AMK58_06250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abf03032
]
AMK58_06250
03400 DNA repair and recombination proteins [BR:
abf03400
]
AMK58_06250
Enzymes [BR:
abf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMK58_06250
DNA replication proteins [BR:
abf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMK58_06250
DNA repair and recombination proteins [BR:
abf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMK58_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ALJ35054
UniProt:
A0A0P0EHE9
LinkDB
All DBs
Position
1364877..1368359
Genome browser
AA seq
1160 aa
AA seq
DB search
MPHADFIHLRVHSAYSLSEGAIKVKELVKLCQKKEMPAVAVTDTGNLFGALEFALAAADS
GVQPIIGTVLGITRVGPANGKPGLPGKAASVPDQLVLLCQSDEGYRNLMKLVSKAFLESD
PMAGPQIPLDALEGHSAGLIALTGGPAGSVGRLLGEGQKDLALDVLERLKRLFPGRLYVE
LQRHRDHFAVIEDAIEPALIELAYAHDLPLVATNDCYFATEDMYEAHDALLCIAEGAYIS
QTERRRLTPDHRFKSAEEMRDLFKDLPEAVDNTVAIARRCSFLLRPIKPILPPFPCEGGR
DEGEELRAQSREGLEMRLNSVVYTPDMTPEQREETRKTYFERLEFELDVIVSMKFPGYFL
IVSDFIKWAKSHDIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERVSMPDF
DVDFCQDRREEVIRYVQDKYGYDRVAQIITFGKLQARAVLRDVGRVLQMPYGQVDKICKL
VPNNPANPVTLQQALDSEEMLRQARDGDETVARLVNIALKLEGLYRHASTHAAGVVIGDR
PLHDLVPLYRDPRSDMPVTQFNMKFVEQAGLVKFDFLGLKTLTVLKTAVDLIPEKPDLTT
VTLDDPRSYEILGRAESTGVFQLESSGMRDVLRRLKPNRLEDIIALVSLYRPGPMDNIPK
YIKVKNGEELPDYMNPALEPILKETFGIMIYQEQVMQIAQVLSGYSLGGADLLRRAMGKK
IKEEMDKERDKFVVGAKDKGVDPDQASMIFDQVAKFAGYGFNKSHAAAYALVAYHTAYLK
ANHPVEFMAASMTLDLGNTDKLNVFRQELVRLKIKLLTPDINKSDSIFGVEALPDGTKAV
RYALAAVKGVGLPAMKAVVEERRKNGPYKSLFDFARRLDLKTINKRQLENLTCAGAFDGI
NPNRAQVHAALETLIRYAQAEAAERDSGIGNLFGGAGGGLKEPDLPKVKEWEPLEKLKHE
FGSIGFYLSAHPLDAFAGPLGRMRVVRSADLATAVTGGGSTRRSVAGIVVSRKEKTAKSG
NRFAFVELSDSSGGYEVTVFSEVLATNRDLLEAGRPVLMTVDVQMNGEDIRLTCQEVKPL
EDAVAQVSDGLKVVVRDGGPVESIRGMLERLARGKGKIHLLVEIDPLKEVEIQLPGSFNI
TNQSRAALKAVPGVVEVVEL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgccgacttcatccacctgcgcgtccactccgcctattccctgtccgagggc
gccatcaaggtgaaggagctggtcaagctctgccagaagaaggagatgccggcggtcgcc
gtaaccgacaccggcaacctgttcggcgcgctggagttcgcgctggccgccgcggattcg
ggcgtgcagccgatcatcggtacggtccttggcatcacccgagtcggccccgccaacggc
aagccgggcctgccgggcaaggcggcgtcagtccccgaccagctcgtcctgctctgccag
agcgacgaaggctaccggaacctgatgaagctggtctccaaggccttcctggaatcggac
ccgatggccgggccgcagattccgctggacgcgctggagggccattccgccgggctgatc
gcgctgaccggcggtcccgccggctcggtcggacggctgctgggcgaggggcagaaggat
ctggcgctcgacgtgctggagcggctgaagcggctgttccccggccggctctacgtcgag
cttcagcgccaccgcgaccatttcgcggtgatcgaagacgccatcgagccggcgctgatc
gaactcgcctacgcccacgacctgccgctggtcgccaccaacgactgctatttcgcaacc
gaggacatgtacgaggcgcacgacgcgctgctctgcatcgccgagggtgcctacatcagc
cagaccgagcgccgccgcctcacccccgaccaccgcttcaagtcggccgaggagatgcgg
gacctgttcaaggacctgccggaggcggtggacaacacggtcgccatcgccaggcgctgc
tccttcctgctgaggccgattaagcccatcctgccgcccttcccctgcgagggcggccgc
gacgagggggaggaactgcgcgcccagtcccgcgaggggctggagatgcggctgaacagc
gtcgtctacaccccggacatgacgccggagcagcgcgaagagacccgcaagacctatttc
gagcggctggagttcgagctggacgtcatcgtgtcgatgaagttccccggctacttcctg
atcgtgtcggacttcatcaagtgggccaagtcgcacgacatcccggttgggccgggccgc
gggtcgggcgccggctcggtcgtcgcctgggcgctgaccatcactgacctggacccgctg
cgcttcggcctgctgttcgaacgcttcctgaatcccgaacgcgtgtcgatgcctgacttc
gacgtggacttctgccaggaccgccgcgaagaggtgatccgctatgtccaggacaagtac
ggctacgaccgcgtcgcccagatcatcacctttggtaagctgcaggcccgcgccgtgctg
cgcgacgtcgggcgcgtgctgcagatgccctacgggcaggtggacaagatctgcaagctg
gtgccgaacaacccggccaacccggtgacgctccagcaggcgctcgacagcgaggagatg
ctgcgccaggcccgcgacggcgacgagacggtggcgcgcctcgtcaacatcgccctgaag
ctggagggtctttaccgccacgcctcgacccacgcggcgggcgtggtgatcggcgaccgg
ccgctgcacgatctggtgccgctgtaccgcgacccgcgctccgacatgccggtcacccag
ttcaacatgaagttcgtcgagcaggccgggctggtgaagttcgacttcctcggcctgaag
acgctgaccgtgctgaagacggcggtggacctgatcccggagaagccggacctgaccacc
gtcacgctggatgacccccgaagctacgagattctggggcgcgccgaatcgaccggggtg
ttccagctggaaagctcgggcatgcgcgacgtgctgcgccggctgaagccgaaccggctg
gaggacatcatcgcgctggtgtcgctctaccgccccggcccgatggacaacatccccaaa
tacatcaaggtgaagaacggggaggagttgcccgactacatgaatccggctctggagccg
atcctgaaggagacctttgggatcatgatctaccaggagcaggtcatgcagatcgcccag
gtgctgtccggctattcgctgggcggcgccgatcttctgcgccgcgccatgggcaagaag
atcaaggaggagatggacaaggagcgcgacaagttcgtcgtcggcgccaaggacaagggc
gtggatcccgatcaggccagcatgatcttcgatcaggtggccaagttcgccggctacggc
ttcaacaagagccacgccgccgcctacgcccttgtcgcctaccacaccgcctatctgaag
gcgaaccacccggtggagttcatggcggcgtcgatgacgctcgacctcggcaacaccgac
aagctgaacgtcttccggcaggagctggtgcggctgaagatcaagctgctgactccggac
atcaacaagtccgacagcatcttcggggtggaggcgctgcccgacggcaccaaggcggtg
cgctacgcgctggccgcggtgaagggcgtcggcctgccggccatgaaggcggtggtggag
gagcggcgcaagaacggcccctacaagagcctgttcgacttcgcccgccgcctcgacctg
aagaccatcaacaagcgccagctcgaaaacctgacctgtgccggcgctttcgacggcatc
aacccgaaccgcgcgcaggtgcacgcggcgctggagacgctgatccgctacgcccaggcc
gaggcggcggagcgcgacagtggcatcggcaacctgttcggcggcgccggaggcgggctg
aaggagccggacctgcccaaggtcaaggagtgggagccgctggagaagctgaagcacgag
ttcggctccatcggcttctacctgtccgcccacccgctggacgccttcgccgggccgctg
ggccgcatgagggtggtgcggtcggcggaccttgccacggcggtgaccggcggcggctcg
acccggcgcagcgtcgccggcatcgtggtcagccgcaaggagaagaccgcgaagtcgggc
aaccgcttcgccttcgtggagctgtccgactccagcggcggctacgaggtgacggtcttc
tccgaggtgctggcgaccaaccgcgacctgctggaggccgggcgcccggtgctgatgacc
gtggacgtccagatgaacggcgaggacatccgcctgacctgccaggaggtgaaaccgctg
gaggacgccgtggcccaggtctcggacgggttgaaggtggtggtgcgcgacggtgggccg
gtggagagcatccgcggcatgctggagcggctggcccgcggcaagggtaagatccacctg
ctggtcgagatcgacccgctgaaggaggtggagatccagcttcccggctccttcaacatc
accaaccagagccgtgccgcgctgaaggcggtgccgggggtggtcgaggtggtggagctg
tag
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