Azospirillum brasilense Sp 7: AMK58_06785
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Entry
AMK58_06785 CDS
T04566
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abf
Azospirillum brasilense Sp 7
Pathway
abf03410
Base excision repair
abf03430
Mismatch repair
abf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMK58_06785
03430 Mismatch repair
AMK58_06785
03440 Homologous recombination
AMK58_06785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abf03400
]
AMK58_06785
DNA repair and recombination proteins [BR:
abf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AMK58_06785
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMK58_06785
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMK58_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ALJ36519
UniProt:
A0A0P0F0A0
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Position
1479268..1481067
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AA seq
599 aa
AA seq
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MTDTVPPFLNVAHSLSGKRWQARPYDERLAWGLAQGRGLPEIVGRVLAARGVTEEACDGF
LNPTLKALLPDPSRFKDMDVAAERIARAIMDGEPVAVFGDYDVDGATSSALLRRFFRAVG
ADLRIYVPDRMKEGYGPNGPALLRLKAEGVRLVVTVDCGISAFAALEAAAEAGLDVVVLD
HHAAEPRLPPAVALVNPNRLDEDGAYRTLCAAGVTFLAVVAVNRALRGAGFYAGRNEPNL
MEWLDLVALGTVCDVVPLTGLNRALVAQGLKVMARRANPGLSALSDVAGVKEKPDAYHAG
FVLGPRVNAGGRVGASDLGARLLSTDDPMEAMELAQKLEAHNAERRAVEQGVLADAMARL
EEHAEELAELVFVAGEGWHPGVIGIVASRLKERYSRPACVIALEQGADGTVIGKASGRSV
RGVDLGAAVIAARQEGLLMAGGGHRMAAGFTVAGNKLADLQAFLTGRVAEQVSAAPLVPT
LELDGALSVGAANAALVDRLNQLGPFGTGNAEPRFAVTDARVVRADVVGANHVRCILQGG
DGARLKAIAFRALDSEMGKALLMGRGSPFHLAGVLRIDRWNGAEGVQLLIDDAAPAQTM
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgttccccccttcctgaacgtcgcccattccctgtccggcaagcgctgg
caggcgcggccctacgacgagcggctggcctgggggctggcccaggggcgggggctgccg
gagatcgtcgggcgggtgctcgccgcccgcggggtgaccgaggaggcctgcgacggcttc
ctgaacccgacgctgaaggcgctgcttcccgacccctcccgcttcaaggacatggacgtc
gcggcggagcgcatcgcccgcgcgatcatggacggcgagccggtggccgtcttcggcgac
tacgacgtggacggcgccacctcctccgcgcttctgcggcgcttcttccgggcggtgggg
gccgacctgcggatctacgtgcccgaccgcatgaaggagggctacggccccaacggcccg
gcgttgctgcggctgaaggccgagggcgtgcggctggtggtgacggtggattgcggaatc
tccgccttcgcggcgctggaagcggcggcggaggctgggctggatgtggtggtcctcgac
catcacgcggccgaaccgcgcctgccgccggccgtcgccctggtcaacccgaaccggctg
gacgaggacggcgcctaccgcacgctgtgcgcggccggggtcaccttcctggccgtggtg
gcggtgaatcgggcgctgcgcggcgccggattctacgcgggccgcaacgagccgaatctg
atggagtggctggaccttgtggcgctgggcacggtgtgcgacgtggtgccgctgaccggg
ctgaaccgggcgctggtggcgcaggggctgaaagtcatggcgcggcgcgccaaccccggc
ctgtccgccctgtccgacgtcgccggggtcaaggagaagccggacgcctaccacgccggc
ttcgtgctcggtccgcgggtcaacgctggtgggcgcgtcggcgcctcggacctcggggcg
cggctgctctccaccgacgaccccatggaggcgatggagctggcccagaagctggaggcc
cacaacgccgaacgccgcgcggtggagcagggcgtgctcgccgacgccatggcccggctg
gaagagcacgccgaggagttggccgagctggtcttcgtggcgggggagggctggcatccg
ggtgtgatcggcatcgtcgccagccgcctgaaggagcgctacagccgccccgcctgcgtc
atcgcgctggagcagggggcggacggcacggtgatcggcaaggcctcgggccgttcggtg
cgcggggtcgatcttggggcggcggtgatcgcggcgcggcaggaagggctgctgatggcc
ggcggcgggcaccgcatggcggccggcttcaccgtggccgggaacaagctggccgacctg
caggccttcctgaccggccgcgttgccgaacaggtgtccgcggcgccgctggtgccgact
ctggaattggacggcgcgttgtcggttggggccgcgaacgccgccttggtggaccggttg
aaccagctcggcccgttcggcaccggcaacgcggagccgcgcttcgccgtcaccgacgcc
cgcgtggtgcgggccgatgtggtcggggcgaatcacgtccgctgcattctccagggcggc
gacggcgcccggttgaaggccatcgccttccgtgcgttggacagtgagatgggaaaagcc
ctgctgatgggccgcggatcgcccttccatctcgccggtgtcctgcgcattgaccgttgg
aacggggcggagggagtccagcttctgatcgacgacgcggcacccgcgcaaaccatgtga
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