Azospirillum brasilense Sp 7: AMK58_12605
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Entry
AMK58_12605 CDS
T04566
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
abf
Azospirillum brasilense Sp 7
Brite
KEGG Orthology (KO) [BR:
abf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abf03032
]
AMK58_12605
03036 Chromosome and associated proteins [BR:
abf03036
]
AMK58_12605
03400 DNA repair and recombination proteins [BR:
abf03400
]
AMK58_12605
DNA replication proteins [BR:
abf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMK58_12605
Chromosome and associated proteins [BR:
abf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AMK58_12605
DNA repair and recombination proteins [BR:
abf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AMK58_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
XPC-binding
HU-CCDC81_bac_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALJ36193
UniProt:
A0A6L3B321
LinkDB
All DBs
Position
complement(2719262..2719546)
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AA seq
94 aa
AA seq
DB search
MTKSELIQRLAERNPHLYQRDIEKIVGTIFDEISEALARGDRVELRGFGAFSVKRRDART
GRNPRTGEAVEVGEKAIPFFKTGKQLRERLNTDE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagagctgattcaacggctcgcggagcgcaatccgcacttgtaccagcgc
gacatcgaaaagatcgtcggcaccatcttcgacgagatctccgaagcgctcgcccgtggc
gaccgggtggagctgcgcgggttcggagccttctccgtcaagcgccgcgacgcccgcacc
ggccgaaacccgcgcacgggcgaagccgtcgaggtgggcgagaaggcgatccccttcttc
aagaccggaaaacagttgcgcgagcgcttgaacaccgacgaatga
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