KEGG   Azospirillum brasilense Sp 7: AMK58_15830
Entry
AMK58_15830       CDS       T04566                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
abf  Azospirillum brasilense Sp 7
Pathway
abf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AMK58_15830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abf03400]
    AMK58_15830
DNA repair and recombination proteins [BR:abf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AMK58_15830
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AMK58_15830
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII DEAD UVR AAA_30 AAA_19 UB2H AAA_16 AAA_22 Met_synt_B12 LarB_N Kinesin Microtub_bd NPHP3_N
Other DBs
NCBI-ProteinID: ALJ36978
UniProt: A0A0P0ED41
LinkDB
Position
ABSP7_p1:462137..464275
AA seq 712 aa
MSHPVLTALPQKSLPKLEAGKKFELVSEFKPSGDQPRAIGELTEGLRAGEKDQVLLGVTG
SGKTFTMAHVIQHVQRPTLVLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYV
PRTDTFIEKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSEMTVDLR
KGQVVAQPDLLRKLTELQYKRNDAAFGRGLFRVRGDTVELFPAHMEDRAWRISLFGDEIE
GIHEIDPLTGEKIASLEAVRIYPNSHYVTPKPTLNQAIEQIKRELKVRLEEFNAQGKLLE
AQRLEQRTTFDIEMMAATGACAGIENYSRYLTGRAAGEPPPTLFEYLPGDALLIVDESHV
MVPQIGGMYRGDRMRKETLSEYGFRLPSAMDNRPLKFEEWEGMRPQTVFVSATPGPWEME
RTGGVFAEQVVRPTGLIDPEVIIRPTETQVDDLIHECKEVVAKGNRVLVTTLTKKMAEAL
TEYMHEAGLRVRYIHSDVETLERIEIIRDLRLGAYDVLVGINLLREGLDIPECSLVAILD
ADKEGYLRSKTSLIQTIGRAARNIEGRAILYADKITGSMQYAIDETARRREKQRAYNLEH
GITPESVKKAIGDILESVYERGDHVTVKTGLNASELVGHNLKSVMADMEKRMKAAAADLE
FEEAARLRDELRRLEAMDLGLEQPGSIGISSARQGRGIPEGAPKKQGRRGRR
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgtcccatcccgtcctgaccgccctcccgcagaagtccctgcccaagctggaggctggc
aagaagttcgaactggtgtcggagttcaagccctccggcgaccagccgcgcgccatcggg
gagctgaccgaggggctgcgcgccggcgagaaggatcaggtgctgctcggcgtcaccggg
tccggcaagaccttcaccatggcgcacgtcatccagcacgtccagcgccccaccctggtg
ctcgccccgaacaagacgctggcggcgcagctctatggcgagatgaagtccttcttcccg
aacaacgcggtggaatacttcgtctcctactacgactactaccagccggaagcctacgtg
ccgcgcaccgacaccttcatcgagaaggaatcctcgatcaacgagcagatcgaccggatg
cgccactcggcgacgcgggcgctgctggagcgggacgacgtcatcatcgtggcgtcggtg
tcctgcatctacggcatcggctcggtcgagacctattcggagatgaccgtcgacctgcgc
aagggccaagtggtcgctcagcccgacctgctgcgcaagctgaccgagcttcagtacaag
cgcaacgacgcggccttcgggcgcggcctgttccgggtgcgcggcgacacggtggagctg
ttccccgcccacatggaggaccgtgcgtggcgcatctcgctgttcggcgacgagatcgag
ggcatccatgagatcgatccgctgaccggcgagaagatcgcctcgctggaggccgtccgc
atctatcccaacagccactatgtgacgcccaagccgacgctcaaccaagccatcgagcag
atcaagcgcgagctgaaagtccggctggaggaattcaacgcccagggcaagctgctggag
gcgcagcggctggagcagcgcacgaccttcgacatcgagatgatggcggccaccggcgcc
tgcgccggcatcgagaactattcccgctacctgaccggccgcgcggcgggcgagccgccg
ccgacgctgttcgagtatctgccgggcgacgcgctgctgatcgtggatgaaagccacgtc
atggtgccgcagatcggcggcatgtaccgcggcgaccgcatgcgcaaggagacgctgtcc
gaatacggcttccgcctgcccagcgccatggacaaccgcccgctgaagttcgaggaatgg
gagggcatgcgcccgcagacggtcttcgtctcggccacccccggcccctgggagatggag
cgcaccggcggcgtcttcgccgagcaggtggtacgcccgaccggcctgatcgacccggag
gtgatcatccggcccaccgagacgcaggtggacgacctgatccacgagtgcaaggaggtg
gtggccaagggcaaccgcgtgctggtcaccacgctcaccaagaagatggccgaggcgctg
accgagtatatgcacgaggcggggctgcgcgtgcgctacatccactccgacgtggagacg
ctggagcgcatcgagatcatccgcgacctgcggcttggcgcctacgacgtgctggtcggc
atcaacctgctgcgcgagggtctggacatccccgaatgctcgctggtcgccatcctggac
gccgacaaggaaggctatctgcgctccaagacctccctgatccagaccatcggccgcgcc
gcccgcaacatcgaggggcgggcgatcctctacgccgacaagatcaccggcagcatgcaa
tacgccatcgacgagacggcgcgccgccgcgagaagcagcgggcctacaacctggagcac
ggcatcacgccggaatccgtgaagaaggccatcggcgacatcctggagagcgtctacgag
cgcggcgaccacgtcaccgtgaagaccggcctgaacgcgtcggaactggtcggccacaac
ctgaagtccgtgatggccgacatggagaagcgcatgaaggccgccgccgccgacctggag
ttcgaggaggccgcccgcctgcgcgacgaactccgccggctggaggcgatggacctcgga
ctggagcagccgggcagcatcggcatcagctccgcccgccaaggtcgcggcattccagag
ggcgctccgaagaagcagggccgccggggacggcgctga

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