Asaia bogorensis: Asbog_00186
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Entry
Asbog_00186 CDS
T04138
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abg03016
]
Asbog_00186 (rnd)
Enzymes [BR:
abg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Asbog_00186 (rnd)
Transfer RNA biogenesis [BR:
abg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Asbog_00186 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAT18498
LinkDB
All DBs
Position
200348..201382
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AA seq
344 aa
AA seq
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MVQLGGVSDVAVIDTLAPGIDLAPLADLLATESCVKVFHAARQDLEIFLHLFDVLPRSIF
DTQVAAMVGGYGDQVGYDTLVNAITGASIDKTHRFSDWAARPLSKAQIAYAAADVTHLRD
VYLALHDELEKQNRLHWADAELAVLNDPATFRPDPRRQWERLKARTNNRRMLGVLREVAA
WRELEAQALNIPRQRLIRDESLLEIAAVRPQDTDALSRVRGVSRGFAEGKAAPGLLAAIQ
TGLDLPEKDLPRPPRKSEGAKPSAALVALLKVVLAASCEANRVAPKLVATSEDLDSLALG
ETDSPVLKGWRRAVFGEDALALLRGDIQLAVEGRLVRLIRDDQA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcagctcggcggcgtgtccgatgtcgccgtgattgacacgctggcgccggggatc
gaccttgcgccgctggccgatctgctggcaacggaaagctgtgtgaaggtctttcacgct
gcccgtcaggatctggaaatcttcctgcatctgttcgatgtcctgccgcgctctattttc
gacacacaggtggcggcaatggtggggggctatggcgatcaggtaggttatgacacgctc
gtcaatgccattaccggcgcgagcatcgacaagacccatcgcttcagcgactgggcagcg
cgccccctgtccaaggcacagatcgcctatgccgcagcagatgtcacgcatctgcgcgat
gtctatcttgccctgcatgacgaactggaaaagcagaaccgtctgcactgggctgatgcc
gagcttgctgtcctgaacgatccggcaaccttccgccccgatccgcgccgccagtgggag
cggctgaaggcccgcaccaataaccgtcgcatgcttggcgtcttgcgcgaggttgcggca
tggcgtgaacttgaggcgcaggcgctgaatatcccgcgtcagcgccttatccgcgatgaa
agcctgctcgaaattgcggctgttcgcccgcaggatactgacgctctctcccgcgtgcgt
ggtgtctctcgtggctttgccgagggcaaggccgcaccgggtcttctggcggcaatccag
acaggccttgatctgcccgagaaggacctcccgcgaccgccgcgcaaatccgagggggcc
aagccttctgcggcgttggttgcgctgctcaaggtcgtgcttgccgccagttgcgaggcc
aaccgcgtggctcccaaacttgtcgcgacgagtgaggatctggacagtctggcgctgggt
gaaaccgatagcccggttctcaagggatggcgccgcgccgttttcggcgaggatgccctt
gcgcttctgcgaggtgatatccagcttgccgttgaaggtcgtttggttaggctgatccgc
gacgatcaggcctga
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