Asaia bogorensis: Asbog_00202
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Entry
Asbog_00202 CDS
T04138
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_00202 (addB)
Enzymes [BR:
abg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asbog_00202 (addB)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Asbog_00202 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
MamL-1
Motif
Other DBs
NCBI-ProteinID:
BAT18514
UniProt:
A0AAN4R209
LinkDB
All DBs
Position
218452..221448
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AA seq
998 aa
AA seq
DB search
MGRPVVTLATIPPDRSFLDDVARRWLAGPARQEADNALILVPSRRAARNLTEAFLRSLDG
KAALLPRIVPVGDVNEEDLALSGAEAFSFPPAVDKLRRLSVLAALVLQAKGVFSADLTLE
QAWPLASALAELMDDAERVGVDLRERLPDAAEPRFADHWHKTLQFLHIVTEAWPQWLQET
GLMNPVARQVAVLQAQAARWRDAPPQGPLWAVGFTDGMFAVCAILRAVLDAPQGCVILPG
VDLDLPETLWDTLPESHPQSGFRRLVSDLGVSRETIALWDDLPPNADKAASQALQARAAL
TSLFMRPMEGLSAWGESTTPLPLAGITRVDADDQQQEAASLAMILRHAVETPGRTASLVT
PDRALARRVATELLRYGIVADDSAGEALALTPASVLLRLVAEAAVANLAPVALLALLKHP
LVALGSTPGNCRATARRLERLVLRGPAPPPGMAGLRLALQKQDQSAAETADSPDQAEPLS
DFLERLSEAMSPLLECGDLPLPDLLTLLVRAAEALATTQDQPGEERLWLGAEGHALSRHV
ASLMTHGAVLPPQGLAGMPAFLLASMAGQMVFGQRVLQGRDGEALHPRVSILGVLEARLQ
FANLVILGGLNEGIWPPATDPGPWLSRPMRTRAGLPSPERLVGTAAHDFTTAFLSGEEIV
LSSASRRDGAPAVPARWLVRLDALLEGRGQNLPSHPALFWQAHLDQPQGAARPVPPPEPR
PPVARRPRRLSVTEIDLWLRDPYAIYARHVLGLRALPALEEAADRSDIGVVVHDGIDAWL
AAGQNGGRALHAALLKAMEGRDLRPALAAWWRPRLMRIADWVCEREAGREKPARISTEQK
GTLTLTPPYAPFKLNARADRIEIGSGGRATIIDYKTGSLPKVSDVEAGWSSQLVLEAAML
RLGGFVGLPPAETASLLYWRLTGDRNRGEELSVPRKPEDLADLVETSLDRLRRRIEAFDN
PTTAYRSHPHPDYVPRYSDYAHLARVSEWSAAREEGGE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaccggttgtgacactggcgacgattccacccgaccgttcctttctcgacgat
gtggcgcgtcgctggctggccggaccggcgcggcaggaggccgataacgcgctgattctc
gtgccgagccgacgcgctgcccgtaatctcaccgaggcgtttttgcgctctttggatggt
aaggcagcactactaccccgcatcgtgccggttggtgatgtgaacgaggaggatctggcg
ctttcgggagccgaggcgttttccttcccgcctgcggtggacaagctgcgccgcctgtcg
gttctggcggcactggtgcttcaggccaaaggcgtattcagcgctgacctgaccttggag
caggcctggccgctggcttctgcccttgcagagctgatggatgatgccgagcgcgttggt
gtcgatctgcgcgagcgtctgcccgatgccgccgagccacgctttgccgatcactggcat
aaaacgctgcagtttctgcacatcgtcaccgaggcctggccgcaatggctgcaggaaacc
gggttgatgaaccctgtcgcgcggcaggtggcggtcctgcaggcgcaggcggcgcgctgg
cgcgatgccccgcctcaggggccgctctgggctgtcggattcaccgatggcatgtttgcc
gtctgtgccatcctgcgtgcagtgctcgatgcgccccagggctgtgtcattctgcccggt
gtggatctcgatctgccggaaacgctgtgggacacattgccggagagccatccgcaatcc
ggattccgacgtctggtcagcgatctgggtgtttcccgtgaaaccatcgcgctctgggac
gaccttccgcccaatgcggacaaggccgcctcacaggcccttcaggcacgtgcggccctg
accagcctgttcatgcgcccgatggaaggcctttcggcctggggagaaagcacgaccccc
ctgccactggccggcatcacgcgtgtcgatgccgatgaccagcagcaggaggccgccagt
ctcgccatgatcctgcgtcatgcggtcgagactcccggccggacggcttcactggtaacg
cctgaccgcgctctggcgcgtcgcgtggcaacggaactgctccgttacggcatcgtggcg
gatgacagcgcaggtgaggcgctggcactcacgcccgcttccgtcctgctgcggcttgtg
gctgaagcggctgtcgccaatctggcccccgttgccctgctggcgctgctcaagcatccg
cttgtcgcgctgggcagcacaccgggcaattgtcgtgccacggcgcgtcgcctcgagcga
ctggtgttgcgcggtcctgcgccaccacccggcatggccggactgcgccttgcgctgcaa
aagcaggatcagagcgcagcagagacggcagacagccccgatcaggccgagccactatcg
gattttctggaacggctttcggaagcgatgtcgcctcttctggaatgtggggatcttccc
ttgccggatctgctcaccttgctcgttcgtgcggcagaggcgctggccacgacacaggat
cagccgggtgaagagcggctctggctcggggcagagggccacgccctgtcgcgccatgtc
gccagcctgatgactcatggtgccgttctgccgccgcagggtctggcgggcatgcctgcc
ttcctgctcgcctcgatggcggggcagatggtgtttggccagcgcgtgttgcaggggcgc
gatggcgaagctcttcacccccgggtctcgatactgggtgtgcttgaggcccggttgcag
tttgccaatcttgtcattctgggtgggctcaatgaggggatatggccgcctgccaccgat
cccggcccgtggctcagccgcccgatgcgcacgcgcgcaggcctgccttcgccagaacga
ctggtgggcacggcggcgcatgacttcaccacagcgttcctgtcgggtgaggaaattgtc
ctgtcgagcgcatcgcgacgcgatggggcacctgccgttccggcacgttggcttgtgcgg
ctcgatgccctgcttgaaggacgcgggcagaacctgcccagccatccggcccttttctgg
caggcccatctggaccagccgcaaggggcagcccgtccggtgccgccgcctgaaccgcgc
ccgcctgtggcccgcaggccgaggcggctttcggtaacggaaatcgatctgtggctgcgt
gatccctatgccatctatgcccgtcatgtgctgggcctgagagccctgcccgctctggaa
gaggcagcggaccgctcggatatcggtgtggtggtgcatgacggcatcgatgcctggctg
gccgcagggcaaaacgggggcagggcgcttcatgcagcgttgctcaaggcgatggagggg
cgagaccttcggccagctcttgcagcctggtggcgcccgcgcctgatgcgtattgccgat
tgggtttgcgagcgcgaggccgggcgagagaaaccggcccggatcagtacggagcagaaa
ggcaccctgaccctgacgccgccctatgcacccttcaaactcaatgcacgcgcggaccgg
atcgagatcggatcgggcgggcgcgcgaccatcatcgattacaagacaggcagcctgcca
aaggtaagtgatgtggaagccggttggagctcgcaacttgtgctggaagccgccatgctg
cgccttggtggttttgtcggcctgccgcccgccgagacagcctctctgctttactggcgg
ctgaccggcgaccggaaccgcggtgaggaactttcggtaccgcgcaaaccggaggatctg
gccgatctggtcgagacatccctcgacaggttgcgccgacgtatcgaggctttcgataac
ccgacaacagcgtatcgctcacacccgcacccggattatgtgccgcgctacagcgattac
gcccatctggcgcgtgtgtcggaatggagtgcagcacgtgaggagggcggggaatga
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