Asaia bogorensis: Asbog_00461
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Entry
Asbog_00461 CDS
T04138
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_00461
Enzymes [BR:
abg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Asbog_00461
DNA repair and recombination proteins [BR:
abg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Asbog_00461
Prokaryotic type
Asbog_00461
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAT18770
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All DBs
Position
complement(507080..508624)
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AA seq
514 aa
AA seq
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MRRDALILFTFLCERRSPASGPRNGNTGSPFMTDTPPSIVWFRDDLRLQDHPALDAASGR
GGRILCVYVLDRSGTTRAQGRASLWFLHGALGSLRQTLKKHGGDCLILEGDPAEILPALA
KETKADILYCHHRYQKEANAQDDAVSQALEKVGCDMKRLHGTVLRQPESVVTKTGTPYKI
FSAWWKGFEGLGAPPSPIPAPSGLSFLPLSFTHGKKTKFAPCDIDKALLPTKPDWASKMG
EYWDHGEEAAHEALDDFASGPLAHYDTGRNDMAAEESSRLSPYLRHGVLSPRQIWHHCKN
KGEPADRETFLSELGWRDFSWYTLFHNPELPQRNLKKQFDSLNWRKSRKDLQAWQKGKTG
IPVVDAGMRQLWETGWMHNRARMIVASFLAKHLLIDWRQGEAWFWDTLIDADPASNAVNW
QWVAGTGIEASPFFRIFNPLRQSDKFDPKGDYIRRWVPELARLPDDAIAAPWQADKDVLE
RAGIRLGRDYPEPIVSLDEGRDRAMTAYRKTKGS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtgatgcgctcatcctgttcacctttttgtgcgaacgccgaagccccgcttcc
ggcccccgcaatggcaacacaggcagccctttcatgaccgacacgcctccctcgatagta
tggtttcgcgatgacctcaggcttcaggatcatcctgcacttgatgcggccagtgggcgc
ggcggcagaattctctgtgtctatgtgctcgaccgttcgggtacgacccgggcacagggc
cgagccagcctgtggtttcttcacggcgctcttggcagtttacgccagacgctgaagaaa
cacggaggagattgcctgatccttgagggggatcccgccgaaatcctgcccgctctggca
aaagagacgaaggccgacattctttactgccatcatcgctatcagaaagaagccaacgcg
caggatgacgccgtctctcaggcgcttgaaaaggttggatgcgacatgaagcgcctgcac
ggtaccgtgctgcgccagccggagtccgtcgtgaccaagaccggcacaccctacaagatc
ttctctgcctggtggaaaggattcgagggattgggggccccgccttcccccatacctgcg
ccttctggcctctctttcctgcctctctcattcacgcatggcaaaaagacgaaattcgcg
ccttgcgatatcgacaaggccttgcttcccaccaagccagactgggcttcgaaaatgggg
gagtactgggatcatggcgaagaggccgcgcatgaggctctggacgatttcgcctccggc
ccccttgcccattacgatacgggccgaaacgacatggccgccgaagagagttcgcggctc
tcaccctatctgcgtcatggcgtgctctcaccccggcaaatctggcatcactgcaagaac
aagggcgagccagccgatcgcgagacctttctgtccgaactcggatggcgtgatttctcg
tggtatacgctgtttcacaatccggaattgccacagcgcaacctcaagaagcagttcgac
tccctgaactggcgcaagagccgcaaggatctgcaggcctggcagaagggaaagacgggc
atcccggtcgtggatgccgggatgcgccagctttgggaaaccggctggatgcacaatcgg
gcgcgcatgatcgtcgcctcgtttctggccaagcacctgctgattgactggcgacaggga
gaagcctggttctgggacacattgattgacgccgacccggcgtccaatgctgtcaactgg
cagtgggtcgcggggacgggcatcgaggcatcaccctttttccggattttcaatcccctt
cgccagtccgataaattcgacccgaagggtgattacatccggcgctgggtgccagaactg
gccagattgcccgatgacgccattgctgcgccatggcaggcagacaaggatgttctcgag
cgtgccggaatcaggctcgggcgtgactatccagagccgattgtctctctcgatgaggga
cgtgacagggccatgaccgcctatcgcaagacgaagggtagctga
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