Asaia bogorensis: Asbog_00825
Help
Entry
Asbog_00825 CDS
T04138
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
abg
Asaia bogorensis
Pathway
abg03030
DNA replication
abg03410
Base excision repair
abg03420
Nucleotide excision repair
abg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asbog_00825 (polA)
03410 Base excision repair
Asbog_00825 (polA)
03420 Nucleotide excision repair
Asbog_00825 (polA)
03440 Homologous recombination
Asbog_00825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abg03032
]
Asbog_00825 (polA)
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_00825 (polA)
Enzymes [BR:
abg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asbog_00825 (polA)
DNA replication proteins [BR:
abg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Asbog_00825 (polA)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Asbog_00825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asbog_00825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH_2
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAT19119
LinkDB
All DBs
Position
907868..910696
Genome browser
AA seq
942 aa
AA seq
DB search
MPYDGVPVEGDAQLVILDHTGCRMSAGKHLVLVDGSGFIFRAFHALPPMSSPEGVPVNAV
YGFTNMLQRLLRDHVGTHLAVVFDAGRQTFRNDIYPQYKAHRPEAPEDLRPQFPLIRDAT
RAFNVPMIELAGFEADDIIASYAEIIEREGGQCTIVSSDKDLMQLVSDRVALLDPIKQKP
IKLAEVEAKFGVPPERVIDVQALMGDPTDNVPGVPGIGPKGAAQLVQEFGTLEAILAAAP
DMKKSKRQQSLIDHAEAARISLRLVTLARDVPLPEPVEALGCREPDAPVLRDFLEKMGFH
SVIQRMGLGALAGKRGVGKVEPTANEATEETTEGDKPYGPYETIQSIDTLKDWIARAQHR
GYFAFDTETDSLNARQATLIGLSLAVAPGEAAYVPLRHEGTLEHPAGGQLDVAEVLETLR
PLLADESVLKIFQNAKYDLLVLSHAGIDNVAPIDDTMLISYAQSAGEHGQGMDELSRLHL
GHEPISYDSVTGTGRSRVPFAQVPIARATEYAAEDADVTLRLWLALKPALRERHALALYE
EMERPLVAILRDMEQAGVKLDAAELRRMSADFGSRMAEMEIEIHALAGRSFNLGSPKQLG
EILFDEMNLPGGKRTKAGAWGTDSSVLQELADAGHELPARILAWRQLAKLKSTYADALVQ
QMDVRTHRVHTSFQMAITTTGRLSSNDPNLQNIPIRTEEGGRIRRAFIAEEGYVLVSADY
SQIELRLLAEVADIGPLKEAFTLGQDIHARTAAEVFNLPIENMDPLTRRRAKAINFGIIY
GISAFGLARQLGIAAGEARRYIDAYFARYPGIRDYMDRTKDDAKRDGYVTTPLGRRCYVP
GIGEKNGARRAYAERQAINAPLQGGAADIIKRAMVRLGRRLPQSGLDARMLLQVHDELLF
EVRADQAEALAEFVRIEMEQAATLSVPLVVETGIGKNWAEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgatggcgtacccgtagaaggagatgcgcagcttgtcattctcgatcataca
ggttgccgcatgagcgccgggaaacatctggttctggttgatggttcgggcttcattttc
cgtgcctttcatgcgctgccgcccatgagcagccccgaaggggtgccggtcaatgcggtg
tatggctttaccaatatgctgcaacgtctgttgcgcgatcatgtcggcacgcatctggcc
gttgttttcgatgccgggcgccagaccttccgcaacgatatctacccccagtacaaggcg
catcgtcccgaagcgccagaagatctgcgcccgcaattcccgctcattcgcgatgcgacg
cgggctttcaacgtgcccatgatcgaacttgccgggttcgaggcggatgacatcatcgct
tcctatgccgaaatcatcgagcgagagggcggtcagtgcacgatcgtctcgtcagacaag
gatctgatgcagcttgtaagcgatcgcgtagccctgctcgatccgatcaagcaaaagccg
atcaaactggccgaggttgaggccaagtttggcgtaccgccagagcgtgtgatcgatgtg
caggccctgatgggcgatccgaccgataacgtgccgggtgtgccggggatcgggcccaag
ggcgcggcgcaattagtgcaggaattcggcacgctggaggcgatcctcgcggccgctccc
gacatgaagaagtccaaacggcagcaatcgctgatcgaccacgccgaggctgcccggatc
tcgctccggctggtgacgctggcacgcgatgtgcccttgcctgaacctgtcgaggccctt
ggctgccgtgagcccgacgcgcccgtcctgcgtgattttcttgaaaagatggggtttcac
tcggtcatccagcgcatgggtctgggggcgctggcgggcaaacgcggcgtcggcaaggtc
gagccgacggccaacgaagcaaccgaagagacgaccgagggcgacaagccctatggcccg
tatgaaaccatccagtccatcgacacactcaaggactggatcgcccgcgcacagcaccgc
gggtattttgctttcgataccgagacggattcgctcaatgcccgtcaggcgacgctgatt
ggcctgtcactggccgtggcaccgggcgaggcggcctatgtgccgctgcgtcatgagggc
acgctggagcaccctgcgggcggccaactggatgtggcagaggtgctcgaaaccctgcgc
ccgcttctggcggatgagtcggtgctgaagattttccagaacgccaaatacgacctgctc
gtgctgtctcacgcgggtatcgataatgtggcaccgattgatgacaccatgctcatttcc
tatgcccagtcggcgggtgagcacggtcagggcatggatgaactgtcgcgcctgcatctg
ggccatgagccaatttcctatgactccgttacgggaacagggcgcagcagggtgcctttt
gcacaggtccccatagcccgcgcaacggagtatgcggctgaggatgccgatgtgacgctg
cgtctgtggctcgctctcaagcctgccctgcgcgagcgtcatgcgctggcgctctatgaa
gagatggaacgccctctggttgccatcctcagggacatggagcaggcgggggtcaagctc
gatgccgcagaactgcgccgcatgtcggccgatttcggctcgcgcatggccgagatggaa
atcgagatccatgctctggcggggcgcagtttcaatctggggtcgcccaagcagcttggc
gaaatcctgttcgacgaaatgaacctgcccggtgggaaacgcaccaaggcaggcgcgtgg
ggcacggattcatcggtgttgcaggaactggccgatgccgggcatgaactccccgcgcgt
attctggcgtggcgtcagctcgccaagctgaaatcgacctacgcggatgcgctggtacag
cagatggatgtgcgcacccatcgcgtacacacctcgttccagatggccatcaccaccaca
ggccgtctgtcatccaacgaccccaacctgcagaatattcccatccgcaccgaggaaggc
gggcgcatacgccgtgccttcattgccgaagagggctatgtgctggtttcagcggattat
tcccagatcgaactgcgccttctggccgaggtggctgatatcggcccattgaaggaagcc
ttcacgctggggcaggatatccatgcgcgcacggccgccgaggtgttcaatctgccgatc
gagaatatggacccgctgacgcgtcgacgcgccaaggccatcaatttcggtattatctac
ggcatttcggctttcggtctggcgcgtcagcttggcatagctgcgggtgaggcgcgtcgt
tatatcgatgcatattttgcccgctatccgggtattcgcgattacatggatcgtaccaag
gatgatgccaagcgtgatggttacgtcaccacgccgctggggcgtcggtgctacgtgccg
ggaattggcgaaaagaacggggccagacgtgcttatgccgagcgtcaggcgatcaacgcc
cccctgcagggcggagctgccgatatcatcaagcgcgccatggtgcgcctggggcgacgc
ttgccacaaagcgggctggacgccagaatgttgcttcaggtgcatgacgaactgctgttc
gaggtccgagccgatcaggctgaggctctggcagaattcgtccgtatcgagatggagcag
gccgcgacactgagtgtgccgctggttgtcgagacaggtattggcaagaactgggcggaa
gcacattaa
DBGET
integrated database retrieval system
