Asaia bogorensis: Asbog_01053
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Entry
Asbog_01053 CDS
T04138
Symbol
ihfB
Name
(GenBank) histone-like bacterial DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abg03032
]
Asbog_01053 (ihfB)
03036 Chromosome and associated proteins [BR:
abg03036
]
Asbog_01053 (ihfB)
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01053 (ihfB)
DNA replication proteins [BR:
abg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Asbog_01053 (ihfB)
Chromosome and associated proteins [BR:
abg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Asbog_01053 (ihfB)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Asbog_01053 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_1
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAT19336
LinkDB
All DBs
Position
1163257..1163553
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIAELSAAHPHLGARHIELIVQTILSEISGALARGDRVEIRGFGAFVVKKRDARQ
GRNPRTGSAVSVEEKTIPFFKAGKELRERVNAHATRRG
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccgaactcattgccgaactctcggcggcgcatcctcatctcggtgcccgt
catatcgagttgattgtccagaccatcctctccgaaatttccggtgctctcgcgcggggg
gatcgggtcgagatccgtggctttggcgctttcgtggtcaagaagcgcgatgcccgtcag
ggacgcaatccgcgcacgggctctgctgtatctgtagaggaaaagaccatcccgttcttc
aaggcaggcaaggaattgcgcgagcgcgtgaacgcccacgcgacccgacgcggctga
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