Asaia bogorensis: Asbog_01106
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Entry
Asbog_01106 CDS
T04138
Name
(GenBank) histone-like bacterial DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abg03032
]
Asbog_01106
03036 Chromosome and associated proteins [BR:
abg03036
]
Asbog_01106
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01106
DNA replication proteins [BR:
abg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Asbog_01106
Chromosome and associated proteins [BR:
abg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Asbog_01106
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Asbog_01106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Urease_beta
HU-CCDC81_bac_2
DUF2267
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
BAT19387
UniProt:
A0AAN4U356
LinkDB
All DBs
Position
1218460..1218744
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AA seq
94 aa
AA seq
DB search
MEKPLNKQELIAAVAEKTDLPKAKAGDVVEALFASIEEALARKQEVRLVGFGSFATATRK
AAKGRNPRTGEEIDIPASVSVRFRPGKGLKDAVS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagccgctgaacaagcaggagctcattgctgcggttgcagaaaagaccgatctg
cccaaggcgaaggccggggatgtcgtcgaggcgctgttcgcgagtatcgaagaggcgctc
gcacgcaagcaggaagtgcgtctggtcggatttggatcgttcgcaacggcaacacgcaag
gctgccaaagggcgcaacccgcgcactggcgaagaaatcgacattcccgcgtcggtttct
gtacgtttccgccccggcaagggcttgaaggatgccgtaagttaa
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