Asaia bogorensis: Asbog_01114
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Entry
Asbog_01114 CDS
T04138
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abg
Asaia bogorensis
Pathway
abg03030
DNA replication
abg03430
Mismatch repair
abg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asbog_01114 (dnaE)
03430 Mismatch repair
Asbog_01114 (dnaE)
03440 Homologous recombination
Asbog_01114 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abg03032
]
Asbog_01114 (dnaE)
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01114 (dnaE)
Enzymes [BR:
abg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asbog_01114 (dnaE)
DNA replication proteins [BR:
abg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Asbog_01114 (dnaE)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Asbog_01114 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RMI2
PucR
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
BAT19394
UniProt:
A0AAN4R350
LinkDB
All DBs
Position
1225583..1229002
Genome browser
AA seq
1139 aa
AA seq
DB search
MSHAPFVHLRNHSAYSLSQGAIRIPDLVALAAESAMPAVALTDTGNLFGALEFSQYCTGK
GVQPIIGCQLALPSRSDKPGAPSEPMVALARNEAGLANLQFLSSEGFLKGDPSDPAILLE
TLCAHADGLFLLTGGTRGPLFRLLAEGQEDQAMTLLRRLQESFGAHMAVELHRHGLPEEK
AVEPGMIAAADRLGLPLVATNECFFSKPAMHEAHDALLCIAQGRTMAEQERWRVTPEHWF
KSPDAMRALFADLPEACDNTLMIAQRCAVKVSTRPPLLPVCPKVNEGATEEETLRAMSEE
GLRQRLSRMEADDDTRRRYEERLEMELGIIGRMGFPGYFLIVADFIQWAKEHDIPVGPGR
GSGAGSLVAWALTITDIDPLPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVRTEY
GGERVAQIITFGKLQARAAVRDVGRVLGLPFGMVNRVAELIPNNPAKPVTLKQAIDGEPR
LQEMRENDEALRRLMEIALQLEGLYRHASTHAAGVVIGDRELVELVPLYRDPKSDMLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILKRGINFIAQQGIEVDLATLPLDDAPTYDMLARGDA
GGVFQFEGAGMRDVLKQMRPTRLEDLIAAVALYRPGPMANIPDYCARKHGASWEPPHEEI
RDILSETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIRAEMDTQREIFVKGATG
RGITPEKAAEVFDLMARFADYGFNKSHAAAYALVSYQTAWMKANHPVAFLAGCMSLAREK
TDKLASLCQEARRMKIKVLPVDINRSKADFSLEKQEDGSWAIRYALAAVKRVGFSAMQAI
VEARGDKPFASLADLAARCDAKQLNKIQIENLAKAGAFDSLDKPRHIVFASSEIIMRRAQ
SDAQEAASGQIGLFGASAEPEELRLAEAPYWPEFERLAAEAEAIGFHMSAHPLDAYRSVL
KRANVLTSQNLMTAAENGSYRVRIAGCVVDKKERPTKSGSKMAWVRLSDATGGCEVTLFS
EVLSRCRDLLVAGQAVMVTADLKLEGDALRITANDVTDLEKAAAQESSEMRVWISEASAV
TKVRDLLSSQGRGRGKIVLVPAVDETKAVEVTLPGHFPVTPRLGEQLRTIHGVSRIDHL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgcccccttcgttcatcttcgtaatcactctgcctattcgctgagccagggg
gcgatacgcatacccgatctggtggctctggccgctgaatccgccatgcctgccgtggcg
ttgaccgatacaggcaatcttttcggggcgcttgaattctcgcagtactgcacgggcaag
ggcgtgcagcccatcatcggctgtcagctcgcgctgccatcgcgcagcgacaagcccggt
gccccgtcagagcccatggtggcgctggcccgtaatgaggcggggcttgccaatctgcag
ttcctctcttccgagggatttctcaagggcgatccttccgacccggccattctgcttgag
actctctgcgctcatgcggacgggctctttctgctaactggcgggacgcgtgggccatta
ttccggctgctggcggaggggcaggaagatcaggccatgacgctgctacgccgcttgcag
gagagcttcggtgcccatatggctgtcgagctgcaccgtcatggtctgcctgaagagaaa
gccgttgagcccggcatgatcgccgctgctgaccgtcttggcctgcctttggtcgccacc
aacgagtgcttcttctccaaaccggccatgcatgaagcccatgatgcgctactctgcatt
gcgcagggacgcaccatggcggagcaggagcgctggcgcgtcacgcctgagcactggttc
aaatctcccgatgccatgcgtgcgcttttcgccgatctgccggaggcctgcgacaacacg
ctcatgatcgcgcagcgctgcgcggtgaaggtctcgacccgtccgccgctcctgcctgtc
tgtcccaaggtgaatgagggcgcgaccgaggaagagacattgcgggccatgtcggaagag
gggctgcgccagcgcctgtcccgtatggaggccgatgacgacacacgcagacgctatgag
gagcgtctggaaatggaactcggcatcatcgggcgtatgggctttcccggttacttcctg
atcgtggccgacttcatccaatgggcgaaggaacacgatatcccggtagggccggggcgt
gggtcgggggcaggctctctcgtggcctgggcgctgactatcaccgatatcgatccgttg
ccgttcaaccttctgttcgaacgattcctgaatcccgaacgcgtctcgatgcctgacttc
gatatcgatttctgtcaggaccggcgcgacgaggtgatccgatacgtgcgcaccgaatat
ggtggcgagcgcgtggcgcagatcatcacctttggtaagcttcaggcgcgcgccgccgtg
cgcgatgtcgggcgcgtgctcggcctgccttttggcatggtcaaccgcgtggcggagctg
atcccgaacaacccggccaagcctgtcacgctcaaacaggcgatcgatggcgagccgcgc
ctgcaggaaatgcgcgagaacgacgaggcgctgcgccgcctgatggaaatcgcgttgcag
ctcgaagggctctatcgccacgcgtcgactcacgcggcaggtgtagtgatcggcgatcgg
gaactggtcgagcttgtgccgctctatcgcgatcccaagagcgatatgctggttacgcag
tataacatgaaattcgtggagcaggccgggctggtgaagttcgactttctcggcctgacc
acgcttaccattctcaagcgtgggatcaatttcatcgcgcaacagggcatcgaggtcgat
ctggccaccctgcctctggacgacgcgcccacctatgacatgctggcccgtggcgatgcg
ggcggcgtgtttcagttcgaaggcgcgggcatgcgcgacgtgctcaagcagatgcgcccg
acgcggcttgaggatctgattgcggctgtggcgctctatcgtccggggccgatggcgaat
attcccgattactgcgcgcgcaaacacggtgcctcatgggagccgccccatgaggaaatt
cgcgatatcctgtccgagacctatggcatcatggtctatcaggaacaggtcatgcagatc
gcgcagaaaatggccgggtacagccttggcggcgccgatctgctgcgtcgtgccatgggc
aagaagatccgcgccgagatggacacgcagcgcgagatcttcgtaaaaggcgcaaccgga
cgcgggatcacccctgaaaaggctgccgaggtgttcgacctcatggcgcgttttgccgat
tacggcttcaacaaatcccacgccgccgcctatgcgcttgtctcgtatcagacggcctgg
atgaaggcgaaccatccggtggcgtttcttgccggatgcatgtcgctcgcccgcgaaaag
acggacaagctggcctcgctatgtcaggaagcgcgtcggatgaaaatcaaagtgcttccc
gtcgacatcaatcgctcgaaggctgatttctcgctcgaaaagcaggaggacggaagctgg
gccatccgctacgctttggctgccgtcaagcgcgtcggattttcggctatgcaggccatt
gtggaggcacgtggcgacaagccttttgccagtcttgccgatctggctgcacgttgtgat
gccaagcagctcaataagatccagatcgaaaatctggccaaggcgggagctttcgattcc
ctcgacaagccgcgtcatatcgtttttgccagctcggaaatcatcatgcgccgtgcgcaa
tctgatgcgcaggaggcggcttcgggtcagattgggctgttcggtgcctcggccgagcct
gaggaactgcgcctggccgaagccccatactggcccgagttcgaacgtcttgcggccgag
gccgaggcgatcggattccacatgtccgcgcacccgctggatgcctatcgctcggtcctc
aagcgggccaatgtgctcacatcccagaatctcatgaccgccgctgaaaacgggtcttat
cgcgtgcgtattgcgggctgtgtggtcgacaagaaggagcgccccaccaagagtggtagc
aagatggcgtgggtacgcctgtccgacgcgacgggggggtgcgaagtgaccctgttctcg
gaagtgctgtcgcgttgccgcgacctgctggtggctggtcaagcggtgatggtgacggcc
gatctgaagcttgagggcgatgcgttgcgcatcacggccaatgacgtgacggatctggag
aaggctgccgctcaggaaagttcggagatgcgcgtatggatcagcgaagcttcagcggtg
acgaaggtgcgcgatcttctcagcagccagggcagggggcgcggcaagatcgtgctggtg
ccagccgtggacgagaccaaggcggtcgaggtgaccctgcccggacacttcccggtcacg
ccacgattgggcgaacaattgcgcaccattcacggtgtatcgcgcatcgatcatctttga
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