Asaia bogorensis: Asbog_01210
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Entry
Asbog_01210 CDS
T04138
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
abg
Asaia bogorensis
Pathway
abg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Asbog_01210 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01210 (fpg)
Enzymes [BR:
abg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Asbog_01210 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Asbog_01210 (fpg)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Asbog_01210 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
DraK_HK_N
Motif
Other DBs
NCBI-ProteinID:
BAT19484
UniProt:
A0AAN4R418
LinkDB
All DBs
Position
1331288..1332172
Genome browser
AA seq
294 aa
AA seq
DB search
MSAPKMPELPEVETILNGLRSALAGRRIISTEVRHDLRWPVPDDLSIRADGKKIRDSTRL
GKYMLIALMRGPTLLIHLGMSGRIRITPGLAKGRAYQPQRHEHVTLRLDNGTHIGLVDPR
RFGCFLLADAGREREHPLLRQLGADPLQPGFDAAYLYEKLHRKRAPIKTALLDQHVVAGL
GNIYVCEILYRAGIHPERLASSLDETQIARIAEITPAVLREAIDAGGSTLRDYVDAEGKK
GAFQDLHQVYGREGEPCPECPGFPACGGIRRLVQAGRSSFYCPRRQLPLSLEDA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcacccaagatgccagagctaccagaagttgaaaccatcctgaatggattaaga
tcggcgcttgccggtcgccgtatcatcagcaccgaggtgcgtcacgatctgcgctggccg
gtgcccgatgatctttcgatccgggcggatggcaagaagatccgtgattcaacccgtctg
ggcaaatacatgctgattgccctcatgcgtggcccgaccctgctgatacaccttggcatg
agcgggcggataagaatcacgcccggcttagcaaagggcagggcctatcagcctcagcgc
catgagcatgtcacactcaggctcgataatggaacacatatcggccttgtcgacccacgg
cgtttcggttgcttcctgctggccgatgcagggcgggagcgagagcaccccctgctgcga
cagcttggcgctgatccgcttcaacccggctttgatgctgcgtatctctatgaaaagctt
catcgcaagcgcgcgcccatcaagacagccttgctcgaccagcatgtcgtcgccgggctc
ggcaatatatatgtatgcgagatcctgtatcgcgccggaattcatcccgaacgtctggcc
tcgtctctggatgaaacgcagattgcccgtattgcagaaatcacccccgccgtgctgcgc
gaggcaatcgatgcagggggatccaccttgcgcgattatgtggatgccgaaggaaaaaag
ggagcgtttcaggatctgcatcaggtttatggccgcgaaggggagccctgtcccgaatgt
ccgggctttccggcgtgcgggggaatccgtcgtctggtgcaggcagggcggtcaagcttc
tattgtccgcggcgtcagctgccactttctttagaggacgcttga
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