Asaia bogorensis: Asbog_01221
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Entry
Asbog_01221 CDS
T04138
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
abg
Asaia bogorensis
Pathway
abg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Asbog_01221 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01221 (xth)
Enzymes [BR:
abg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Asbog_01221 (xth)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Asbog_01221 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAT19495
UniProt:
A0AAN4U2Y3
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All DBs
Position
complement(1344753..1345556)
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AA seq
267 aa
AA seq
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MRLMTWNINSLRLRLPLLQRLGEEQAPDIICLQETKVPDALFPAAPLRELGYDHQHFLGM
KGYNGVAILSRHPIRPIEATPDWCGKSDTRHIGVVIDTTTGPVMLHDFYVPAGGDIPDPA
VNDKFAHKLAFLTEVTAWFRENPPIRSIVVGDLNIAPLEHDVWSHKQLSTVVSHTPPEIE
RLNAWAATGFVDAMRLVVPPQEKLYTWWSYRNRDWKLSNRGRRLDHVWLTPDLQPALTNL
NVLRDVRDWDSPSDHVPVVFDLDLSAA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgatgacgtggaatatcaattcgttgcgcctgaggctgcccctgcttcagcgc
cttggtgaggaacaggcgcccgatatcatctgcctacaggagacaaaggtccccgacgcc
ttgtttcccgcagcccccttgcgtgagctcggctacgatcatcagcatttcctgggcatg
aagggatataacggggtcgcgattctctcgcgccatcccatcaggccgatcgaagcaacg
cccgactggtgcggcaagagcgatacacggcatatcggcgtcgtcatcgacaccacaacc
ggccctgtcatgcttcatgacttctatgttccagcgggcggcgacattcccgatccggcg
gtcaacgacaaatttgcccataaactggcttttctcactgaggtgacggcctggtttcgt
gagaatccgccgatacggtccatcgtggttggtgacctgaatatcgccccgctcgaacat
gacgtgtggagccacaagcagctctcgaccgtggtgagtcatacgccacccgagatcgaa
cggctcaatgcctgggcggcgaccgggtttgtcgatgccatgaggctggtcgtcccgcca
caggagaaactctatacgtggtggtcctatcgcaatcgcgattggaagctttcaaaccgg
gggcggcgcctcgaccatgtatggctgacgccggatctgcagccagcactcacgaacctc
aacgtgttgagagacgtaagagactgggacagcccatcggatcatgtcccggtggtgttc
gatctcgatctgtctgccgcatga
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