Asaia bogorensis: Asbog_01223
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Entry
Asbog_01223 CDS
T04138
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C UvrC
KO
K03703
excinuclease ABC subunit C
Organism
abg
Asaia bogorensis
Pathway
abg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asbog_01223 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01223 (uvrC)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asbog_01223 (uvrC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
HHH_5
HHH_2
HHH
GIY-YIG
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BAT19497
UniProt:
A0A0P0YGN8
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All DBs
Position
1346923..1348830
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AA seq
635 aa
AA seq
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MKTTQTDPSVRDAQAVDTAEQPTRKEGAEAIREALKTIPFTPGVYRMLGEKGEVLYVGKA
LSLKKRVSSYLRLNQLPERLRRMVSLTRSMEIVTTRTEAEALLLEANYIKKMKPRFNILL
RDDKSYPWIMLTEGHEFPQITKQRGRPVKNATYWGPFASAWAVNQTLNLIQRSFLLRSCS
DAVLSSRTRPCLLFQIRRCSAPCVDRVTPGQYAELVDETKQFLSGKSTDVHKTLVEEMER
ASEALEFERAAAIRDRIRGFSSMQESGIINPASIGDADIIALWQEAGRTCIQVFFIRNSR
NNGNRAFFPDHAEEESAADILAAFLLQFYDDKPPPPQILLNSDPAELDLVSEALSLKRGR
KVELLQPQRGERRDVVRHAETNAREALERRLAESAGVSKLLNGVAGVFGLAEPPKRIETY
DNSHIMGQHAYGVMVVGGPEGFVKRAYRKFAIKGPVTPGDDFGMMREVMERRFGRRDPEA
PEARPEDWPDLLLIDGGLGQFNAVRAVLEDLNVRDIPIVAIAKGPDRDAGREWFFQEGRT
PFQLPPNDPVLYYLQRLRDEAHRFAITTHRAGRSKAIKVSELDSVPGVGAVRKRALLTRF
GSVRGVRGASLEELVSVSGINSETARTIYEFFHPQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccacgcaaactgacccctctgttcgtgatgctcaggctgttgataccgctgaa
cagcctacccgcaaggagggcgcagaggccataagagaagcgctgaaaaccatcccgttc
acgcccggcgtctatcgcatgctgggagagaagggagaggtactgtatgttggcaaggcg
cttagccttaaaaagcgtgtgtcgtcctatctccgtctcaaccagttgccggagcggctg
cgccgcatggtgagccttacacgatcgatggagatcgtgacgacgcgcaccgaggccgag
gcgctgcttcttgaggccaactacattaagaagatgaagccacgcttcaacatcctcctg
cgcgatgacaaatcctatccctggatcatgctgaccgaggggcatgagtttccgcagatt
accaagcagcgtggccgcccggtcaagaatgccacctattgggggccgtttgcctcggcc
tgggctgttaatcagacgctgaacctgatccagcgcagttttctgctgcgttcctgcagc
gatgccgttttgtcgtcacgcacacgaccttgcctgctgttccagatccgtcggtgctcc
gcaccctgtgtagacagggtgacaccggggcaatatgccgagctggtggatgagacgaaa
caattcctctcgggcaagagcacggatgtgcataagacacttgtcgaggagatggaaaga
gcctctgaagcgctcgaatttgagcgtgcagcggccatacgcgatcgtatccgtgggttc
tccagcatgcaggaatcggggatcatcaacccggcctcgattggcgatgctgacatcatt
gcactctggcaggaggcgggacggacctgcatccaggttttcttcatccgtaattcccgt
aacaacggaaatcgggctttcttccctgatcatgcggaggaggagagtgcggcagatatt
ctcgcagccttcctgctgcagttctatgatgacaaacccccaccaccccaaatcctgctt
aacagcgaccctgcggagctcgacctcgtttcggaggcgctgagtctcaagcgcgggcgc
aaggtggaactgttgcagccacagcgtggcgagcggcgcgacgtggttcgtcacgccgaa
accaatgcgcgtgaagcactcgagcggcgactggcagagagcgctggtgtcagcaagctg
ctcaacggtgtggcgggcgtcttcgggctggcagagccgccgaagcggattgagacctat
gataactcccacatcatggggcagcacgcttacggtgttatggtggtgggcgggccggaa
gggttcgtcaagcgcgcctatcgcaagtttgccatcaaggggcccgtcacgcctggtgac
gattttggcatgatgcgtgaggtgatggagcggcgctttggccgtcgcgatcccgaagca
ccggaggcccgcccggaagactggcctgatctcctgctgatcgatggcgggctggggcag
ttcaatgctgtccgggccgttctggaagatctgaatgtgcgcgatattcctatcgtggcc
atcgccaaagggccggaccgcgatgcggggcgtgagtggttctttcaggaggggcgcacg
ccattccagttgccgccgaatgatccagttctttactaccttcagcgcctgcgggatgaa
gcgcaccgcttcgccatcacgacgcacagggcagggcgtagcaaggccatcaaggtgtca
gagctcgatagcgtgccgggtgttggtgccgtgcgcaagcgcgcccttctgacgcggttc
ggctcggtgcgtggtgtccgtggcgccagcctggaggagcttgtctcggtatcgggaatc
aattcagagactgcccgcacgatttacgagttttttcacccgcaatga
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