Asaia bogorensis: Asbog_01252
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Entry
Asbog_01252 CDS
T04138
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
abg
Asaia bogorensis
Pathway
abg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asbog_01252 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abg03019
]
Asbog_01252 (recQ)
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01252 (recQ)
Enzymes [BR:
abg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asbog_01252 (recQ)
Messenger RNA biogenesis [BR:
abg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Asbog_01252 (recQ)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Asbog_01252 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
BAT19526
UniProt:
A0AAN4U3T3
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All DBs
Position
1376931..1378772
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AA seq
613 aa
AA seq
DB search
MDLTDLSSIVSDERETPDAVLNRVFGFSSFRGQQAEVIEAVMNGEDVLVIMPTGGGKSLC
YQVPALCRPGMGIVISPLIALMDDQVAALRQLGVNAAALHSELDPDRLERIRSDLRDGRL
DILYISPERLVSPGTARWLARNPVSVLAIDEAHCVSAWGHEFRPEYRALADLPEIFPGVP
RIALTATADSRTQDDILLALGMPQARRLTSSFHRPNLFLAASPKGSETKQVQDALTRHRD
DASIVYCGSRNRTERMAKSLREKGFNALPFHAGLSPQEKHATLLRFRSGEPMVIVATVAF
GMGIDRPDVRCVVHLDMPASPEAYYQQIGRAGRDGAPADTLLLYGGEDMARARYWLEQSN
APETEKRVMQARLESMIALTETVGCRTQALLACFGEVLPTPCGHCDNCRTPAETFDGTEA
AQKVLSTIYRTGQRFGAVHLTTVLRGKLTEAIERHAHQHLTVFGVGKEHSEQWWRGVIRQ
LIARGAIRMSGEHGTLGLDVDAARPILRGEEKLRLRSDPMKAQSFTTRNAPAASIVDALD
EEERARFEALRRWRREEAREQEIPPYVIFHDAVLTEIARENPDSVDALSDIKGVGASKLK
RYGDAVIAALEGD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaactgacctctcctcaatcgtctccgacgagcgcgaaacgcccgacgcggta
ctgaaccgcgttttcggtttctcgagtttccgggggcagcaggcagaggtcatcgaagcg
gtcatgaatggcgaggatgtgctcgtcatcatgcccacaggcggcggcaagagcctttgc
taccaggttcccgccctgtgccggccgggcatggggatcgtgatctcacccctgattgcg
ctaatggacgatcaggtggcggcattgcgccagctgggtgtcaatgcggcagccctacac
tccgagctcgatccggaccggcttgagcgcatacgcagcgatctgcgcgatggtcgcctc
gatatcctctatatctcgcccgagaggctggtatcacccggtacagcgcgctggctcgca
cgtaacccggtatcggtccttgcgatcgacgaggcccattgcgtctcggcatggggccac
gaatttcgtcccgaatatcgggccctggcggatctgccagagatcttccccggcgttccc
cgtatcgccctgacggccacagccgactcacgaacgcaggatgatatcctgctggcgctg
ggcatgccgcaggcgcgccgcctcacatccagtttccatcgtcccaatctgttccttgca
gcctctccaaagggctccgagacgaagcaggtgcaggacgcactcacccggcatcgcgac
gatgcctcgattgtctattgcggcagccgcaaccgcacggagcgcatggcgaaaagcctg
cgtgagaaaggcttcaacgccttgccgtttcacgccgggctgtcgccacaggaaaaacac
gcaacgcttctgcggtttcgcagtggcgagccaatggtcatcgtcgcgacagtagccttc
ggtatgggcatcgaccgcccggatgtccgctgtgtggtccatctggacatgcccgcttcg
cccgaggcctattatcagcagatcggtcgggcagggcgcgatggggcacccgccgatact
ctcctgctctatggcggtgaggatatggcgcgggcgcgttactggctggagcagtcgaac
gcgccagagacagaaaagcgcgtcatgcaggcgcgtctggagagcatgatcgcgctgaca
gaaaccgtcggctgtcgtacacaggccctgcttgcctgctttggtgaagtcttgccgact
ccctgcgggcattgcgataattgcaggacgcccgccgagacatttgatggcactgaggcc
gcgcagaaagtgctttccacgatctaccgcaccggccagcgctttggcgccgttcatctc
acgacggttctccgtggcaagctgactgaggcgattgagcgtcatgcccatcagcatctc
accgtgttcggcgtcggcaaggagcattcggagcagtggtggcgcggtgtgatccgtcag
cttattgcgcgcggggccatcaggatgagtggcgagcacggtacattagggctggatgtc
gacgcggctcgcccgatcctgcgtggtgaggaaaagctgcgtctgcgcagcgaccccatg
aaggcacaaagcttcactacgcgtaatgcgccggctgcgtcgattgtggatgcgctggac
gaggaggaacgtgcacgtttcgaggctctgcgccggtggcgacgcgaggaagcccgtgag
caggaaatcccgccctatgtcatcttccatgacgcggtcctgaccgagatcgcccgggaa
aaccccgactctgtcgatgccctctcagacatcaagggcgtaggggcatcgaagctcaag
cgctacggtgatgccgtgatagccgcgctggagggcgactga
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