Asaia bogorensis: Asbog_01329
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Entry
Asbog_01329 CDS
T04138
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
abg
Asaia bogorensis
Pathway
abg03030
DNA replication
abg03430
Mismatch repair
abg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asbog_01329 (holB)
03430 Mismatch repair
Asbog_01329 (holB)
03440 Homologous recombination
Asbog_01329 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abg03032
]
Asbog_01329 (holB)
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01329 (holB)
Enzymes [BR:
abg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asbog_01329 (holB)
DNA replication proteins [BR:
abg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Asbog_01329 (holB)
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Asbog_01329 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_5
AAA
AAA_24
AAA_22
SLFN-g3_helicase
AAA_25
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAT19603
UniProt:
A0AAN4R6R9
LinkDB
All DBs
Position
complement(1478111..1479052)
Genome browser
AA seq
313 aa
AA seq
DB search
MSSPENPSATALIGHEAEKALFRQALESGRLHHGWMIHGDSGIGKTSFAFDCARVLLNGT
DRQSRAGRQITAGTHPNLLLITRRMDEKRKRMRQEIVVDDVRPVQDFLHHTAADGSWRVV
IVDAAETLNRNAANALLKLLEEPPTDTVFFLTCPSPSALLPTIRSRCRLLGLAPLTTEQT
AAVLRAQGRSVAELQTLVAQAHGAPGRILSADQGTDRAARDLATALLATGETPDADSLAA
FLRHDDGFAVLCSLLGEGLADRARTLAGQGKLAEASQAAEAFSALQALQRETERFNLDKN
QAVRQAAAIASAP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccctgagaacccgtctgcgactgccttgatcgggcatgaggcggagaaagcc
ctgtttcgacaggcgctggaatccggtcgcctgcatcatgggtggatgattcatggcgat
tcaggcattggcaagacgagctttgccttcgactgcgccagagtgctgctgaatggtacg
gatcggcagagccgtgcaggacgacagattacagcaggtacccatcccaatcttttgctg
atcacccggcgcatggatgagaagcgcaagcgcatgcgtcaggaaatcgtggtggatgac
gtccgccccgtgcaggattttctgcatcatacggctgcggacggttcgtggcgcgtcgtc
attgtcgatgccgccgaaaccctcaaccgcaacgcggccaatgcgctgctcaagctgctt
gaggaaccgcctaccgatacggtgtttttcctgacctgtccttcaccctcggctttgttg
cccaccatcagaagccgttgccgtctgctggggctggccccgctaaccaccgagcagacg
gccgcagtgctcagggcgcagggcagaagcgttgccgaactccagacccttgtcgcgcag
gcgcatggtgcgcccggccgcatcctctctgccgatcagggcacagacagagcggcccgc
gatctcgccacggcgctgctggcaaccggcgaaacacccgatgcagacagtcttgccgct
ttcctgcgtcacgatgacggttttgccgtgctctgttctttgctaggagaggggcttgca
gaccgcgccagaacattggcggggcaggggaagcttgccgaggccagccaggccgccgag
gctttctctgcccttcaggcgctacagcgcgagaccgagcggttcaatctggacaagaat
caggctgtcagacaggcagccgccatagcgagtgctccatga
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