Asaia bogorensis: Asbog_01372
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Entry
Asbog_01372 CDS
T04138
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
abg
Asaia bogorensis
Pathway
abg00730
Thiamine metabolism
abg01100
Metabolic pathways
abg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Asbog_01372 (thiC)
Enzymes [BR:
abg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Asbog_01372 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAT19646
LinkDB
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Position
complement(1529366..1531234)
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AA seq
622 aa
AA seq
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MDDSTLHSTKVNTLDRAPAHGTVTTGPISGSRKIISSPADRPDITVPFREIDLEPTANEP
AVRVYDTSGPYTAPGYHADVSLGLPRLRDHWLSRRGLTKVTETRATKPEDNGFAKGDHAV
PQCPAPHGVLCGQDGHPVTQYEFARAGIITEEMIFVAHRENLGRAEMVEGAEARRADGED
FGAEIPSFITPEFVRSEIAAGRAIIPANINHPELEPMIIGRNFLVKINANIGNSAVTSSA
AEEVEKLVWSIRWGADTVMDLSTGRNIHNIRDWILRNSPVPIGTVPLYQALEKVGGVAED
LTWEIYRDTLIEQAEQGVDYFTIHAGVRIAHVPLTAQRTTGIVSRGGSIMAAWCLAHHRE
NFLYEHFDEICDIMRRYDISFSLGDGLRPGSIADANDAAQFAELETLGELARIAWAKGCQ
VMIEGPGHVPMHKIKINMTKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYG
CAMLCYVTPKEHLGLPDRSDVKVGVITYKIAAHAADLAKGHPAAQIRDDAISRARFEFRW
QDQFNLALDPDTARSYHDETLPKEAHKTAHFCSMCGPKFCSMKISHDIRRNAEREQGMED
MKESFKAHGGKLYLRTDEVEPA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcaacgcttcattccaccaaggtcaacacgctcgatcgcgcgcccgcgcat
ggcacggtaacaaccggtccgatctcgggctcgcgcaagattatttcaagcccggctgac
cggcccgatattactgtaccatttcgcgagatcgatctcgaacccaccgcgaacgagccc
gcggtgagggtttacgacacatccggcccctataccgcccccggctatcatgctgatgta
tctcttggtctgccccgactgcgcgaccattggctgtcgcgccgtggcctcacgaaagtg
accgaaacccgcgcgaccaagcccgaggacaacggcttcgccaagggcgatcatgcggtg
ccccagtgcccggccccccacggcgttctgtgcgggcaggatggccaccctgtgacccaa
tacgagttcgcccgtgcagggatcatcacggaagagatgatcttcgtcgcccatcgtgaa
aatctcgggcgcgccgaaatggtcgagggtgccgaggcacgccgtgccgatggtgaggat
ttcggggctgaaattccgagcttcatcactcctgaattcgtgcgctcggaaatcgcagcc
ggtcgcgcaatcatccctgccaacatcaaccatcccgaactcgagcccatgatcatcggg
cgcaactttctggtgaagatcaacgccaatatcggcaattcggcagtgacatcctccgcc
gccgaggaggttgaaaaactggtctggtccatacgctggggcgccgatacggtgatggac
ctctcaaccggtcgcaatattcacaatatccgcgactggatcctccgcaactcgcccgtg
ccgatcgggaccgtgccgctttatcaggcgcttgagaaagtgggcggcgtcgccgaagac
ctgacctgggaaatctatcgcgacaccctgatcgaacaggcagagcagggggtggattac
ttcaccatccatgcaggcgtccgcatcgcccatgtgccgctcacggcgcaacgcaccaca
ggtatcgtctcacgcggcgggtcgatcatggccgcatggtgcctcgcacatcaccgcgag
aatttcctgtacgaacatttcgacgagatctgcgacatcatgcgtcgctacgacatctcg
ttctcgctgggcgacgggctgcgccctggctcaatcgccgatgcaaacgacgcagcccag
tttgccgagctggaaacgctaggcgaactcgcccgtattgcatgggcgaagggatgtcag
gtcatgatcgaagggccgggccatgtgcccatgcacaagatcaagatcaacatgaccaag
cagctgcgcgaatgtggcgaagcccccttctatacgcttggtccgctcaccaccgatatt
gcccccggctatgatcacatcacctcaggcatcggcgccgcgatgattggctggtatggt
tgcgccatgctctgttatgtcacacccaaagagcatcttgggctgccagaccgatccgac
gtcaaggtgggggtcatcacctacaagatcgccgcccatgccgctgacctcgctaagggg
catcctgcggctcagattcgtgatgatgccatctcgcgtgcacgtttcgaattccggtgg
caggaccagttcaatctggcactcgacccggatacggcgcggtcctatcacgacgagacc
ctgccgaaagaggcgcacaagactgcccatttctgctcgatgtgcgggcccaaattctgc
tcgatgaagatcagtcatgacatccggcgcaatgctgaacgtgagcagggcatggaagac
atgaaagagagcttcaaggcccatggcgggaagctttatctgaggacagacgaggtcgag
ccggcctga
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