Asaia bogorensis: Asbog_01457
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Entry
Asbog_01457 CDS
T04138
Name
(GenBank) DNA helicase II UvrD/Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abg
Asaia bogorensis
Pathway
abg03420
Nucleotide excision repair
abg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asbog_01457
03430 Mismatch repair
Asbog_01457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abg03400
]
Asbog_01457
Enzymes [BR:
abg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asbog_01457
DNA repair and recombination proteins [BR:
abg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asbog_01457
MMR (mismatch excision repair)
Other MMR factors
Asbog_01457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
RXLR
DUF3553
AAA_11
Tudor_1_RapA
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAT19730
UniProt:
A0AAN4R6Q1
LinkDB
All DBs
Position
1625617..1627845
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AA seq
742 aa
AA seq
DB search
MTQSLIPSPSPDYLERLNPEQREAIETTEGPLLILAGAGTGKTRVLTTRFAHILLDGRAR
PYQILAVTFTNKAAREMRERVGALLGETVEGLWLGTFHALCARMLRRHAEYVGLTTGFTI
LDTDDQLRLVRQIMEPFRLDTKRWPPQALLGIFQRWKDRGLTPEQVTTAEDTDFAGGQAR
KLYAAYQDRLKAVNACDFGDLMLHTLEILRTQPDVLAQYHRLFRYILVDEYQDTNTIQYL
WLRLLAKREHGPANIACVGDDDQSIYSWRGAEVENILRFEKDFPGAKIVRLERNYRSTAQ
ILAAASGLIAHNSGRLGKTLRPGREDAQGEKLQIISAWDSDEEARIAAGAIERLRSEGHP
LSQIAILMRAGFQTRPFEERFLTLGLPYRVVGGLRFYERAEIRDAMAYMRVLAQPADDLA
FERIINVPKRGVGAAGLQKLHHEARSLNAPLSVGVAHALDTGLVKGKGREALSGLMEAFA
RARETRKSEGHVVAMEQLLEESGYLPMWRDDKSPEAPGRLDNIKELLRAIGDFGTLEGFL
EHVALVTETEDKASADTVSLMTLHGAKGLEFDTVFLPGWEEGVFPSQRSLDEGGLKSLEE
ERRLAYVGITRARKRAIIIHAARRRIYANWQDSMPSRFIDEIPAETVEHSGQAMQERRQA
AAQTSIFASGPLSSTQGRFRTPAPRVTDVRPDASHGIASGARVFHQKFGYGTVLGVESDR
LHINFEKAGEKRIMAHFVEQVS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaatcccttattccatccccctcgcctgactacctcgaacgcctcaatcccgag
caacgggaggccattgagacgaccgagggtccgcttctgatcctagctggagcgggaacg
ggcaagacacgcgttctgaccacgcgttttgcgcatatcctgctcgatggccgcgcgcgc
ccgtaccagattctggcagtcaccttcaccaacaaggctgcccgtgaaatgcgcgagcgt
gtgggtgccctgctgggtgagactgtagaagggctgtggctgggcacattccatgccctg
tgtgcgcgaatgctgcgccgtcatgctgaatatgtcgggctgaccactggctttacgatc
cttgataccgacgaccagcttcggctcgtgcgtcagatcatggagccgttccgcctcgat
acgaaacgctggccacctcaggctttactaggcatttttcagcgctggaaagatcgcggt
ttgacgcccgaacaggtgacgaccgccgaggatacggattttgcaggaggacaggcgcgc
aagctttacgccgcctatcaggaccggctcaaggcggtcaatgcctgtgactttggcgat
ctcatgctgcatacgctcgagatcctgcgcacacagccagacgttctggcccagtatcac
cggctgttccgctatattctggtcgatgagtatcaggacaccaatacaatccagtatcta
tggctgcgtctgctggccaaacgcgagcacggaccggccaatatcgcctgcgtgggggac
gacgatcagtcgatctattcatggcgtggtgccgaggtggaaaacatcctgcgcttcgaa
aaggatttccccggcgcgaagatcgtacgcctcgagcgtaactaccgttcaacagcccag
atccttgctgcggcctcagggctgatcgcccataactcaggccgtctgggcaagacgctt
cggcccggtcgcgaggacgcacagggcgagaagctgcagatcatcagcgcatgggattcg
gacgaggaagcccgtatcgctgccggggccatcgagcggctgcgcagtgaggggcacccc
ctctcccagattgccattctgatgcgagcaggctttcagacacgcccctttgaagaacgt
ttcctgacacttggcctgccttatcgcgtggtcggtggtttgcggttctatgagcgcgcc
gaaatacgcgatgccatggcgtatatgcgtgttctggcccagcccgccgatgatcttgcc
tttgagcggatcatcaacgtgccaaagcgcggcgtgggtgctgccgggttgcagaagctt
catcatgaggcgcgcagcctgaatgcgccgctcagtgttggtgttgctcatgccctcgac
accggcctggtgaaaggcaagggtcgcgaagccctgtcaggcctcatggaggcctttgcc
cgcgcccgcgaaacccgtaagagcgagggccatgtggttgccatggagcagttgctggag
gaaagcggctacctgccgatgtggcgcgacgataaatcacccgaagccccagggcggctt
gataatatcaaggaattgcttagagccatcggtgatttcggcacgctcgaaggctttctg
gaacatgtggctttggtcaccgagaccgaggacaaggcgagtgctgacacggtcagcctt
atgaccctgcatggggccaaggggctagagttcgacaccgtgttccttcccggctgggag
gagggggtgtttccctcacagcgcagcctcgatgaaggtggtctcaagagcctcgaggaa
gaacgcaggctggcttatgtcgggattacccgcgccagaaaacgggcgatcatcattcat
gccgcccgtcggcgcatctatgccaattggcaggactccatgcccagccgcttcatcgat
gagattcctgcggaaacggtcgagcatagtggacaggccatgcaggagcgccgtcaggct
gccgcacagacctccatttttgcatcgggcccgttgagcagcacgcaagggcgtttccgc
acacctgccccccgcgtgacagatgtgcgccccgatgcctcacacggaattgcctcgggc
gcacgcgtgttccatcagaaattcggctatggcaccgtgctcggtgtcgaatccgaccga
ttgcatatcaacttcgagaaggcaggcgaaaaacgcattatggcccattttgtggaacag
gtctcgtga
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