Asaia bogorensis: Asbog_01856
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Entry
Asbog_01856 CDS
T04138
Name
(GenBank) ribonuclease D/3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abg03016
]
Asbog_01856
Enzymes [BR:
abg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Asbog_01856
Transfer RNA biogenesis [BR:
abg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Asbog_01856
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAT20116
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All DBs
Position
2063199..2063846
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AA seq
215 aa
AA seq
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MAAPSASIHLYDGDLPDDFDLGPVVAVDTEAMGLNPHRDRLCLVQLSAGDGEAHLVQIRP
KSLGGRYEDCPNLKALMADESVTKLMHFARFDVALLQHALGIKVAPVICTKIAARLVRTF
TDRHGLAHLCRELLGVDLAKQQQTSDWGSEVLSPEQLSYAASDVLHLHALWAKLEALLIR
EGRRELAQACYDFLPARGQLDILGYEEPDIFSHRA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccgagcgcttcgatccatctttacgatggtgatctccccgatgatttcgat
ctgggtccagtcgtcgccgtcgataccgaagccatgggcctcaacccgcatcgcgaccgt
ctgtgcctcgtgcagctttccgccggcgatggcgaagcccatctggtgcagatccgtccg
aaatcgctgggcggtcgctacgaggactgcccgaatctcaaggcactcatggctgatgaa
agcgtgacaaagctcatgcatttcgcccgcttcgacgtggcactgcttcagcacgccctt
ggcatcaaggtcgcgcccgtcatctgcaccaagattgcagcccgcctggtgcgcaccttc
accgatcgtcatggtctggcgcatctgtgccgcgaattgctgggtgtcgatctggccaag
cagcagcagacgtctgactggggctcggaagttctctcccctgagcaactgagctatgcc
gcttcggatgtgcttcatctgcatgcactctgggccaagcttgaggccctgctcatccgt
gaaggccggcgtgagctcgcccaggcctgctacgatttcctgccagcccgtgggcagctt
gatatcctgggctatgaagagcccgatatcttctcccatcgcgcctga
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