Asaia bogorensis: Asbog_02078
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Entry
Asbog_02078 CDS
T04138
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abg
Asaia bogorensis
Brite
KEGG Orthology (KO) [BR:
abg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abg03016
]
Asbog_02078 (truB)
Enzymes [BR:
abg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Asbog_02078 (truB)
Transfer RNA biogenesis [BR:
abg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Asbog_02078 (truB)
Prokaryotic type
Asbog_02078 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAT20334
UniProt:
A0AAN4U1A6
LinkDB
All DBs
Position
complement(2301542..2302495)
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AA seq
317 aa
AA seq
DB search
MGRKKGQDIDGWLVVDKSLKVGSTDVVNKARRLFDAKKAGHGGTLDPLATGILPVAFGQA
TKTIPYIMDATKRYRFTLFLGESRTTDDREGEVVLTSEHRPSDAELRAALPALIGDIMQV
PPVYSALKVDGERSYDLARAGRPPDLPPRPARVDSITLVDRPDRDHAVFEVQSGKGVYMR
SLARDIALACGTVGHIAVLRRTKCGPFDETHAITLDKLVQNDDKADALSALLRPVSTALA
DIPALAMTDAEAQALRFGQSLSLADCAALMLTPQEGDVLQAQEGGCLVGLCRVQEGRLKP
IRIFESFKYGDRDVDYS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaaaaaagggcaggatatcgacggctggctggtcgtcgacaagagcctgaaa
gtcggttcgaccgatgtggtgaacaaggcacgccgcctgttcgatgccaaaaaggctgga
catggcggcacgctggaccccttggcgacgggcattctgccggttgcttttggtcaggcc
accaagacgatcccctatatcatggatgccaccaagcgttatcgcttcacgctgttcctt
ggtgagtcgcgcacaaccgatgaccgtgaaggtgaggtcgtgctgacaagcgagcatcgc
cccagtgatgctgaattgcgcgcggctcttcccgcgctcatcggtgatatcatgcaggtg
ccgccggtctattcggcgctcaaggtggatggcgagcgatcctatgacctcgcgcgggcc
ggacggccgcccgatctgcccccccggcctgcgcgcgttgactccatcacgcttgtggac
cgtcctgatcgtgaccatgccgtgttcgaggttcagtcgggcaagggcgtgtatatgcgc
agccttgcccgtgatatcgccctggcctgcgggacagtcgggcatattgccgtattgcgc
aggaccaaatgcggcccgtttgacgagacccatgcgataacactggacaagctggttcaa
aatgacgacaaggccgatgcactttcagcgcttctgcgcccggtctcgaccgcgctggcc
gacatcccggctctggccatgaccgacgcagaagcacaggccttgcgctttggacagagc
ctatctctggccgattgcgccgctctgatgctgacaccgcaggagggtgacgtcctgcag
gcccaggagggggggtgtcttgtcggtttgtgccgcgtccaggagggccgtctcaagccg
atacgaatattcgagtcgtttaaatacggagacagagatgtcgattacagctga
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