Acinetobacter baumannii TYTH-1: M3Q_548
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Entry
M3Q_548 CDS
T02261
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abh
Acinetobacter baumannii TYTH-1
Pathway
abh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M3Q_548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abh03021
]
M3Q_548
03400 DNA repair and recombination proteins [BR:
abh03400
]
M3Q_548
Enzymes [BR:
abh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M3Q_548
Transcription machinery [BR:
abh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M3Q_548
DNA repair and recombination proteins [BR:
abh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M3Q_548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AFU36641
LinkDB
All DBs
Position
582503..586675
Genome browser
AA seq
1390 aa
AA seq
DB search
MRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDGLFCAKIF
GPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIWFLKSLPS
RIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFTALEEHGDEFVAKMGA
EAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPEWMVMNVL
PVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQES
VDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLR
LHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASVIRQHPVM
LNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLEAQLEARA
LMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNRALATGQV
AIHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPEGLSFDMINLEMTKKNIS
KLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIIDKAETEVR
EIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEKQKSFNSI
YMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTHGARKG
LADTALKTANSGYLTRRLVDVAQDLVITEPDCGTSGGLVMTPFIQGGDVIEPLRDRVLGR
VTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVCAKCYGRD
LARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNKGTVRFHN
VKTVQHAKGHLVSVSRSGEIGIADELGRERERYKLPYGASILLKDGELVEAGGIVATWDP
HTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLRPAIVLDT
TDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADLFEARKPK
EHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHVNRGETIS
DGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKVDIIDGGD
TSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAASFQETTRV
LTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHALHNDFSEVDQA
FSQALNSEQF
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagaaaacggactcagatggtcatgcaccagttgagttcgaccgtatccgtatt
ggtcttgcgtcaccagaaatgattaagtcatggtctcatggtgaagttaaaaaacctgag
acaatcaactatcgtacgttcaaaccagaacgtgatggtttgttctgtgccaaaatcttt
ggtccagtaaaagattacgaatgcttgtgtggtaaatacaagcgtatgaaatacaaaggc
gtcatttgtgaaaaatgtggcgttgaagtaactacagcaaaagttcgtcgtgaacgtatg
ggtcacattgagcttgcttctccagttgcacatatctggttcttaaaatcgttaccatcc
cgtatcggtttattacttgatatgacacttcgtgatatcgaacgtgtattgtatttcgaa
tcatacgttgttactgatcctggtatgacaccatttgaaaagtatcaacttcttaatgat
gaagaatactttactgctctagaagagcacggcgacgaatttgttgcaaaaatgggtgca
gaagcagttcaagacttgttgaaagacatcgaccttgaagctgaaatttcacgtttacgt
gaagaaattcctcaaacaacttctgaaacgaagttgaaaaaagcgtctaagcgcttgaaa
ttgatggaagcattcaaagactcaaacaacaagccagaatggatggtaatgaatgtactt
ccggtacttccaccagatttacgtccattagttccacttgaaggtggtcgtttcgcgact
tctgacttgaacgacttatatcgtcgtgtaattaaccgtaacaaccgtttgaagcgtctt
cttgaccttgcagcgccggacatcatcgtacgtaacgaaaaacgtatgttacaagagtct
gtagatgcgttgcttgataacggtcgtcgtggtcgtgcaattactggttctaacaaacgc
ccattaaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgtcagaacttg
ttaggtaagcgtgttgactactctggtcgttcggtaattactgtaggtcctactttacgt
cttcaccaatgtggtcttccgaagaaaatggcacttgaattattcaagccattcattttc
gcgaaattacaagcttcaggtcaggcaacaaccattaaagctgcgaagaaaatggttgag
cgtgagaccccggaagtttgggacgttcttgcatctgtaattcgtcaacatccagtaatg
ttgaaccgtgcgccaacacttcaccgtttaggtcttcaagcatttgaacctattcttatt
gaaggtaaggcaatccgtcttcacccactcgtctgtgctgcgttcaacgccgacttcgac
ggtgaccaaatggcggtacacgttccattgacacttgaagcacagttagaagctcgtgca
ttgatgatgtcaacaaacaacatcttgtcaccagcaaacggtgagccaatcatcgttcct
tctcaggacgttgtcttgggtctttactacatcactcgtgatgcagtaaacgcgaaaggt
gaaggcatggtgtttgcggatactcacgaagtaaaccgtgcacttgcaactggtcaagtt
gcgatccatgctcgtgttaaagtacgtgtgcatcaaacggttatcaatgaaaatggtgag
cgtgaacagcaaactattattgttgatacaacaccaggtcgttgcttactttgggaagtt
gttccagaaggcttaagctttgacatgatcaaccttgagatgactaaaaagaacatctct
aagttaatcaactcttgctaccgtaaacttggtttgaaagatacagttatcttcgctgac
caattaatgtacttgggcttccgtcaagcgactcgttcaggtgtatctgtaggtatggaa
gacatgttaattccacctacgaaacacacaattattgacaaagcggaaacagaagttcgt
gaaatcgaacaacagttcgaacaaggtttcgtaactgctggtgaacgttataacaaagtt
gtcgatatttgggcgcgtacaaacgaccaagttgctaaagcaatgatggataacttgtct
tatacacttgtgaaaaacaaacaaggtgaagacgagaagcaaaaatcattcaacagtatc
tatatgatgtctgactctggtgcccgtggtagtgcggctcagattcgtcagcttgcaggt
atgcgtggtttgatggcaaaaccggatggctcgattattgagactccaattaaagcgaac
ttccgtgaaggtttgacagtactccagtacttcatttcaacacacggtgcgcgtaaaggt
ttggccgatactgcattgaaaactgcgaactctggttacttgactcgtcgtcttgtagac
gtagcacaagacttagtaattactgagccagattgtggtacaagtggtggtctagtgatg
actccattcattcaaggtggtgatgtcatcgagccattacgtgaccgcgtattaggtcgt
gtaactgctgaagatgtacgtcgtgcatctgatgatgaagttgtattacctcgtggtacg
ttaattgacgagaaaatcgcggctcagcttgaagaggctggtgtcgatgaagttaaagta
cgttctgtaatcgcatgtgaatcaacattcggtgtatgtgcgaaatgttatggtcgtgac
cttgctcgtggtcacttggtaaacccaggtgagtcagtaggtgtaatggctgcacagtca
atcggtgaaccaggtacacagttaacaatgcgtacgttccacgtgggtggtgctgcaagc
cgaacttctgctgcaaacagtgttcaagtacgtaacaaaggtactgtacgtttccataac
gtaaaaactgtacaacatgcgaaaggccacttggtttcagtttcacgttcaggtgaaatt
ggtattgccgatgagttaggccgtgagcgtgaacgctacaaacttccttacggtgcgagc
atcttgttgaaagatggtgagcttgttgaggctggtggtatcgttgcgacatgggatccg
catacgcatccattggtaacagaagttgctggtaaagcacgtttcagccaaattgctgat
ggtgtaactgcaacatctaaaactgatgatgcaactggtatgacaactgttgaaatcttg
cctgtaacagcacgtcctgcttctggtaaagatttacgtccagcaatcgtattagataca
actgatggcggtgaacagttctacttcttaccacaaaacacaattgtgactgttcgcgac
ggcgaaacaattggtgtgggtgacgttatcggtcgtgtaccacaagaatcttcacgtact
cgtgatattaccggtggtcttccgcgtgttgctgacttgttcgaagcacgtaagccgaaa
gaacatgcgatcttggcagaagtgtctggtatcgtaagcttcggtaaagagaccaaaggt
aagaaccgtttagtgattactccagatgacggttctgaaatttacgaagagttgattcca
aaatggcgtcaaatcaacgtgtttgaaggtgaacatgtgaaccgtggtgaaaccatttct
gatggtccacaaaatccacatgacatcttacgcttgaaaggtgaagttgctttaactaac
tacatcgtgaacgaagttcaagacgtttaccgtctccaaggtgtaaaaatcaacgataag
cacattgaagttatcgtacgtcaaatgttgcgtaaagttgatatcatcgatggtggtgat
acaagcttcatcaaaggtgaacaagtggattacatccgtgttgttcaagagaaccaagct
gtcttggcgcagaacaagttccctgcgaagtttgaacgtcaattgatgggtattacgaaa
gcatcgctttctactgactcattcatctctgctgcatcgttccaggaaacaactcgtgtg
ttaactgaagcggctgtaacaggtaaagaagatgatttacgtggcttgaaagaaaacgtt
gtagtgggtcgcttgattccagctggtactggtcttgcataccacttagagcgtcgtcgt
caagaagcggaagcagcagaacatgctcttcacaatgacttcagcgaagtagaccaagca
tttagccaagctttaaactcagaacaattctaa
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