KEGG   Aciduliprofundum boonei: Aboo_0197
Entry
Aboo_0197         CDS       T01180                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
abi  Aciduliprofundum boonei
Brite
KEGG Orthology (KO) [BR:abi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abi03400]
    Aboo_0197
Enzymes [BR:abi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Aboo_0197
    5.6.2.6  RNA 3'-5' helicase
     Aboo_0197
DNA repair and recombination proteins [BR:abi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Aboo_0197
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII AlkZ-rel Cas3-like_C_2 SNF2-rel_dom
Other DBs
NCBI-ProteinID: ADD08009
UniProt: D3TBS4
LinkDB
Position
complement(205064..210130)
AA seq 1688 aa
MERATKMYSMDEVISLFDPIIGEWFTSKYSELTEPQAYAIPLIHSGKNVLVSSPTGSGKT
LTAFISIINELFLLAKEGKLEDKVYCVYVSPLKALANDIHRNLEVPLEEIKDLAKSKGVK
IPKIRVAVRSGDTSTAERQKMLRKPPHIFITTPESLSLVLTAPKFRESFRDVRYVIVDEI
HELANNKRGVMLSLNLERLQYLAKNFQRIGLSATQAPIEEIAKYLVGYEGEEPRNVSIVE
VEVRKKLDLKVITPVEDLTLVPYEVANEKMYDVLVDIINRHRTTLIFTNTRSGTEHVAYK
LKEKGIENLEAHHGSLSKETRLRVEKALKEGKLKAVISSTSLELGIDIGYIDVVVQIGSP
KSIAKGLQRIGRSGHAYGATAKGRFLVFDNDELIECTTLVKCAYDGKIDRVRIPKNSLDV
LSQIIVGMSIEKRWNVDEAYNIIRSSYCYHELPKEKFIQVLRYLGGYVLGDTVYSKIWFD
EEDMVFGRKRSSRMIYFMNMGTIPDEADYLVIDHEGKRLGSLSEKFVEKLQKGDVFVLGA
RSYEVLSIRTGKVVVKDATGKRPTVPSWVGEMLPRSFDLSVEVGKFREFVEKNIRERGEK
KTIEILMKDYYLDYRGARSIVSYIKQGMHHIVPTHKRVVIEGYVDPAGKHNIIFHYPFGR
RVNDALSRAYAFKITEKYGVNVGISITDDAFMLTLKRRIRLEDIKNLLSSDEIEDALRRA
IFNTELFKQRFRHCASRSFMVLRRYKGRDISVARQQLRSDKILRLLSEIPDFPVMEETYN
EIFNIVMDLPHAKEVLRKIENGEIEVKIVPYSDTPSIFAHSIILSGISDIVLMEDRSALL
KELHMKLLERVIPKEELAAMFDEAQVSAYFQNKIKVRGKEDILRFLDLAPGTDVLRRRGI
NIYDYSEIPNDKLKKMVEELIWDDKIVSVYTTRLLWTTPQNYPIFATLYSKNSDNIMEFE
GLKTAEEIAKEKKKKVQEVLEILKSMEKAYLVGRKIKEGKTYWYRRERITIERNYALEIL
IKKLLYFRAPLTFEEIVYSLHISEEDIRKALKYLVEEGEVVKGVFLVGYGEQYMLRSDYN
EILKESGIDEESLQAYRFGKIVREMGMDEYFEKFLVLFNEDSMRIRNAYEQFTEALRREE
VLYGRFMRGRLCYASRATLPLLIAVYRKRGLNENDRKVLSQIGLLGDRATFSTLKEMSNM
YPHEIKKIIEKLENNLYIYRKVLPNKKPGDYPFKIMKIQPNGSMEEFFERIVKGYGPLTK
KDIENITALDPKDYLGKFKKISAGGKIFYYTEGNIEGDGKGEYIIPSDDPYIYTRLNELY
DHFGEVLSHVYVKDGKLLSIMELKRHSDHIYVNEFMGNKNAYEILAKESIVITSNDPKNE
SYRRIGDYYVSGDVSSIQFSPKDIFAYLLWKSRVISGRKLKTTLDVARFLMGLHNSLENV
RAYKPIEIEKYYHSELLYETLDLQGHIIYASKENVGIYQSLKNMHLDKDMEVVLKILEKY
GKMEVRSIIEESPLGSEKTRRALTSLYTGNYIAKYPSGYIYIKPLYSRDYASQKYVENLV
NILGFVNPEIVCHLSGGYVSSYESAEILNRMNLTKGIFLNDGNLYRIPNEDMENIENIEI
YDDVIILDPKDPVSMLWQYIKPMDFQGYMVIKEGEIVGIVKAIMRKRSVKIQKYTTEEAK
RLFKNYFS
NT seq 5067 nt   +upstreamnt  +downstreamnt
atggagagagctactaagatgtacagcatggacgaggtgatatcgctttttgacccgatt
ataggggagtggtttacttccaagtattccgagcttacagagcctcaggcttatgcgatc
cccctaattcattcaggtaagaatgttcttgtatcttcacccacagggagtggtaaaact
ctgactgctttcatatccattatcaatgaattatttcttttagccaaagagggaaagctt
gaggataaggtctactgcgtttatgtatcccccctcaaagcccttgcaaatgatatacat
aggaaccttgaagtgcccttggaagagataaaagatctggctaagagcaaaggggtcaaa
attccaaagattcgtgtagcagttcgctctggtgatacgagcactgcagagagacaaaaa
atgcttcggaagcctcctcatattttcataaccactcctgagtccctatccctcgttctc
acagccccaaagtttagagagagtttcagggatgttaggtatgtaattgtcgatgagata
cacgagcttgcaaataataagaggggagttatgctatctttgaatcttgaaaggttgcaa
tatctcgccaagaattttcagcgaatagggctaagcgcaactcaagcacccatagaagag
attgcaaagtatcttgttggatatgaaggggaggagccaaggaatgtgagtattgttgaa
gttgaggtgaggaaaaaacttgatttaaaggttataacgcctgttgaggatttaaccctc
gtgccttacgaggttgcaaatgagaagatgtacgatgttttggtggatataataaacagg
catcgtacaacgctgattttcacaaatactagaagtggaactgagcatgtggcttacaag
cttaaggagaagggtattgaaaatttagaagcgcatcatggctctttgagcaaagaaacg
aggttgagagttgagaaagcattgaaggaggggaagttgaaggctgttatatcttcaaca
tctcttgaattgggcattgatatagggtacattgatgtggttgtgcaaattggctctcca
aagagcatcgccaagggattgcagagaatagggcgcagtggacatgcttatggtgccacg
gctaaaggcagattcttggtttttgataatgatgagctaatagaatgcaccacattggtt
aaatgcgcatacgatggcaagattgatagagttagaattcctaagaactctctagatgtt
ctctctcaaatcatagtgggtatgagcatagagaagaggtggaatgtggatgaagcctac
aatataattcgctcctcttactgttatcacgagttgcccaaggagaaattcatacaagtg
cttcgctacctcgggggctatgttttaggggacacagtttattcaaagatatggtttgac
gaggaggacatggtatttggaaggaaacgcagtagcagaatgatttattttatgaacatg
ggtacaattccagatgaggcagattatcttgttattgaccacgaagggaagagattgggc
agcttaagcgagaaatttgtagaaaaattgcagaaaggagatgtttttgttttaggtgcg
agaagctatgaagtgctgagcataagaactgggaaagttgtagtgaaagatgccacaggt
aagagacccacagttccttcttgggttggcgagatgctcccccgctcatttgatctaagt
gttgaagttggaaaatttagagagtttgtagagaaaaatataagggagagaggagagaaa
aagacgattgagattttgatgaaggattattatctggattacaggggtgcgagaagtatc
gtatcttatataaagcaggggatgcaccacatagtacccacgcacaagagggttgtgata
gaggggtatgtggaccctgcagggaaacacaacataattttccattatccgtttgggagg
agggtcaatgatgccctttcaagagcttacgctttcaaaataaccgagaagtatggtgta
aatgttggtataagcataaccgatgatgcctttatgcttacccttaagcgtagaattcgt
cttgaagatataaagaatcttttaagttcggatgagattgaagatgccttgcggagggcc
atatttaatacagagcttttcaagcagagatttagacactgtgcatctcgctctttcatg
gttctgcgaagatacaagggaagagatatatccgtagcaagacagcagcttaggagcgat
aagatattgcgtcttttaagcgagataccggattttccagttatggaagagacatacaat
gagatattcaacatagttatggatttgccccatgcaaaggaagttctaaggaagattgaa
aatggtgaaatcgaagttaaaatagtgccatatagcgatacacccagcatctttgctcat
agcataattctatcgggtatttcggatatagttttaatggaagaccgcagtgcattgctc
aaggaactgcatatgaaactcttggagagagtgatacccaaggaagaactagctgccatg
tttgatgaggcacaagtaagtgcttattttcagaataagataaaggttaggggcaaagag
gatattttgcgctttcttgatttagcccccggaactgatgtacttcggagaaggggtata
aacatttatgattactctgagataccaaacgataaactcaaaaagatggttgaagaacta
atttgggatgataagattgtatccgtttacacaacacgccttctctggaccacacctcaa
aattatccaatatttgcgactctttactccaagaattctgataacataatggagtttgaa
ggtttaaaaactgccgaagagattgccaaggagaaaaagaaaaaagtgcaagaggtattg
gaaattttgaaaagtatggaaaaagcataccttgtaggacgcaaaataaaggaaggtaag
acatactggtataggagagaaagaataacaattgaaaggaattatgctttagagattttg
attaaaaaactcctttatttccgggctcccctaacctttgaggagatagtttattctctg
catatttcagaggaggatattaggaaagctttaaaatatttggttgaagagggagaggtt
gttaaaggcgtgtttcttgtgggttatggagagcagtacatgcttcgttccgattacaac
gagattttgaaagaatcaggaattgatgaagaatctttgcaggcctatcgatttggaaag
atagtcagagagatgggcatggacgagtattttgaaaaattcttggtactttttaatgag
gattctatgcgtataagaaatgcctatgagcaatttacagaggctttgagaagggaagag
gtactttatggaagatttatgagaggtaggctgtgctatgcaagcagagcaactttgcct
ctactaatagcagtgtatagaaaaagagggctaaatgaaaatgatcgcaaagtcctgtct
cagataggattgcttggagatagagccacattttccacgcttaaagaaatgagcaacatg
tatcctcatgaaataaagaaaataattgagaaattggagaataatctgtacatatatcgc
aaagttttaccaaacaaaaagcccggagattatcctttcaaaataatgaaaatacagcca
aatggaagtatggaagagttttttgagagaatagtgaagggctatggtccgttgacgaag
aaagatattgagaatataacggccctggatccaaaagattatcttgggaagttcaagaag
ataagtgcaggaggaaaaatattctattataccgaggggaatattgagggagatggtaag
ggagagtatatcatcccatcggatgacccttatatatacacaagattgaatgagctctat
gaccattttggagaagttttgagtcatgtttatgtgaaggatggaaaactcctaagcatt
atggaattaaagagacactcagaccatatttatgtaaatgaatttatgggaaataaaaat
gcttatgaaattcttgcaaaagagagtattgtaataacttcaaatgatcctaaaaatgag
agctataggagaataggagattactatgtttcgggagatgtaagttccattcaattttcc
cctaaagatatctttgcttatctcctctggaagagcagggttatatctggaagaaagtta
aaaaccactcttgatgttgcgagattcttaatgggtttacacaattcattggaaaatgta
cgtgcttacaagcccatagagattgaaaagtattaccactctgagcttctctatgagaca
ttggatttgcagggacatattatttatgcgagcaaggagaatgttggtatttaccaatct
ttgaaaaatatgcatttagataaggatatggaagttgtattgaaaatccttgaaaagtat
ggtaagatggaagttcgcagcataattgaagaatcacctttgggaagtgagaaaactagg
agggctttaacatctctctacacaggaaattacatagcaaagtatccttcaggctatatc
tatataaagcctttatactccagggattatgcctctcaaaaatatgtagagaacttggtt
aacattttagggttcgtcaatcccgagattgtttgtcatttgagtgggggatatgtttca
agttatgaatctgcagaaattctaaacaggatgaatttgaccaagggtatatttctcaac
gatggaaatctttatagaattccaaatgaggatatggagaatattgaaaatatcgaaatt
tacgatgatgttattattcttgacccaaaggacccagtatctatgctctggcaatacata
aaacccatggattttcagggatatatggttataaaagagggtgaaattgtaggaatagta
aaggcaattatgcgcaaaagaagcgtcaaaatacaaaaatacaccacagaggaagctaaa
agattgttcaaaaattatttctcttaa

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