Aciduliprofundum boonei: Aboo_0342
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Entry
Aboo_0342 CDS
T01180
Name
(GenBank) translation factor pelota
KO
K06965
protein pelota
Organism
abi
Aciduliprofundum boonei
Pathway
abi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Aboo_0342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abi03019
]
Aboo_0342
Messenger RNA biogenesis [BR:
abi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Aboo_0342
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADD08153
UniProt:
B5IDS4
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All DBs
Position
345442..346428
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AA seq
328 aa
AA seq
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MKIEEKEKNEIAIRVDNLDDLWYLSTILGEGDLVFGYVFRKDTSSGDMNRAKKAERKKIR
VGINVKKLDFQEFADRLRISGIIVAGPEDYVGVHQTINVGVGDEISVIKEWSKKDKELLG
EAVKNSEKPVVYFLAIEHGLATIAILKTYGIQEFASIRKRGDEDEEFFGEALSTLKDVWD
GRAPLIILGPGFYKENFVNFAKDKIGNYIMVQASHGDLRGIYEVLKSGALDKILKEHRLS
QEEKLVDTLLTEIKKEGLYAYGINEVKNYLNMGAVRDLLITDKNYKKYKELMDLALQTGA
QVHIISTTHEAGKILESLGGVAALLRFR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaagagaaggagaaaaatgaaatcgcaataagagtggacaatcttgacgat
ttatggtatctaagcacaattttgggagagggtgacctggtatttggatatgttttccgc
aaagatacctcaagcggggatatgaacagggccaagaaggcagagagaaaaaaaatccga
gttggaataaatgtgaaaaaactcgattttcaggagtttgcagatagattgcgcatctca
ggtataatagtggctggaccagaggattatgtgggagtgcatcaaaccataaatgttggg
gtgggggatgagatatcggtaataaaagagtggagcaagaaggataaagaactattaggg
gaggcagttaaaaattcagagaaacctgttgtttattttttagccatagagcatggcctc
gctacgattgcaattttaaaaacctatggaattcaagaatttgccagtataaggaagagg
ggcgatgaggatgaggaattctttggtgaggccctttcaacccttaaagatgtttgggat
gggagagcccccttgatcatattaggtccaggattttacaaagagaattttgtgaacttt
gccaaggacaaaattggaaattacattatggttcaggcatctcatggagatctccgtgga
atttacgaagtcctaaaatcaggagcattagataaaatattgaaagagcatagactatct
caagaggagaaattggtggataccttgctcacagaaataaagaaagagggtttatacgct
tatggaatcaatgaggttaaaaactacctaaatatgggcgctgtaagagatttattgatt
acggataaaaattacaaaaaatataaagagctgatggatcttgcattgcaaacaggagct
caggtgcatataatcagcacaacccatgaagctggaaaaattttagagagtttaggagga
gttgctgcccttcttagatttaggtga
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