Aciduliprofundum boonei: Aboo_0405
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Entry
Aboo_0405 CDS
T01180
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
abi
Aciduliprofundum boonei
Pathway
abi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Aboo_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abi03019
]
Aboo_0405
03009 Ribosome biogenesis [BR:
abi03009
]
Aboo_0405
04131 Membrane trafficking [BR:
abi04131
]
Aboo_0405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abi04147
]
Aboo_0405
Messenger RNA biogenesis [BR:
abi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Aboo_0405
Ribosome biogenesis [BR:
abi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Aboo_0405
Membrane trafficking [BR:
abi04131
]
SNARE
SNARE associated proteins
Others
Aboo_0405
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Aboo_0405
Exosome [BR:
abi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Aboo_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_14
AAA_22
TIP49
AAA_33
nSTAND3
Bac_DnaA
RNA_helicase
AAA_28
IstB_IS21
AAA_24
DUF815
Sigma54_activat
Mg_chelatase
AAA_7
NPHP3_N
ATPase_2
AAA_18
Parvo_NS1
TsaE
AAA_17
ABC_tran
AAA_25
NACHT
AAA_lid_PRS2_C
PhoH
Zeta_toxin
SLFN-g3_helicase
NB-ARC
DUF5906
AAA_3
ATPase
AFG1_ATPase
Zot
Motif
Other DBs
NCBI-ProteinID:
ADD08216
UniProt:
B5IAE0
LinkDB
All DBs
Position
complement(403322..405505)
Genome browser
AA seq
727 aa
AA seq
DB search
MKKNKNEGIVVKVAEARSRDVGRGIARIDPVIFEKMGLMPGDTILIEGKKKTAAMVMRGY
PEDEGSGLIRIDGYTRRNAGVGIDDKVTIKKVSATPATQVTFAPTQPLRLMGGEEYLKNL
LEGRVITRGDVITLNVMGNTIDLIATVVKPVKDVVLITSSTEIKISEKPAKESQGISMVT
YEDIGGLKEEIKKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAHFIYLSGPEIMSKFYGQSEENLREIFKEAQDNAPSIIFIDEIDSIAPKRDEVSGEVER
RVVAQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEIGIPGKNARKEILE
IHTRGVPLAENVDLEKLADMTHGYVGADLAALVKEAAMRALRRVIPEIDLEMEKIPVEIL
EKLQVTWEDFMDAYREMQPSTMREVLIEKPNIHWDDIGGLEQVKQELREVVEWPMKYRKL
FAHMKVKIPKGILLYGPPGTGKTLLAKAVATESEANFISVKGPEFLSKWVGESEKAVREV
FRKARQAAPAVIFIDEIDAIAPMRGRDIGSHVTERVVSQILTEMDGLEELHNVTVIAATN
RPDILDPALLRPGRFDRIVYVPIPDKDARKEIFKIHLRGRPLAEDVDIDKLAEKTEGYTG
ADIEAVCNEATILALREFIQSGKNPDEPKDAKIEMKHFEEALKKVKPLSKEEREMYERMV
DRFRKRE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataaaaatgaaggaatagtggtgaaagtagcggaagcacgctcaagagat
gtggggcgtggaattgcaaggatagaccctgttatatttgaaaagatgggcttgatgccc
ggagatacaatattaattgagggtaagaagaaaacagctgcaatggttatgcgaggatat
cctgaggatgagggaagtgggcttataagaattgatggatacacccgcagaaatgctggt
gttggaatagatgataaagtcacgataaagaaagtatctgctacacccgcaactcaagtt
acattcgctccaactcagcctcttcgccttatgggtggagaggaatacctcaagaatctg
cttgaggggagggtgattaccaggggtgatgtcatcacgctcaatgttatgggtaatacg
attgatctcatagcaacagttgttaagcccgttaaagatgtggtattgataacctcctcc
accgagataaaaataagtgagaagcctgcaaaggaatctcaaggtatttcgatggttacc
tacgaggatattggtggtctcaaggaggaaataaagaagattcgcgagatggtagagtta
ccgttaaggcatccagagctatttgagagattaggcattgaaccaccaaagggcgtgttg
ctttatggacctccagggacaggtaagaccctgcttgctaaggctgttgcaaatgaagca
aacgcccatttcatatacctcagtggaccagagataatgagtaaattctatggccagagc
gaggagaatttaagggagatattcaaagaggcacaggataatgctcctagcataatattc
atagacgaaattgattccatagctccgaagagagacgaggttagcggtgaggtagagcgt
agagttgtggcacaattattggctttaatggatggcttagaatcccgcggtaaggttgtc
gttataggtgcaaccaacaggccaaatgcattggaccctgcgttgcgcagacctggaaga
tttgatagggaaattgaaataggcatacctggaaagaatgcgaggaaggagatacttgag
atacatactcgcggagttcctcttgctgagaatgttgatttggaaaaacttgcggatatg
acccatggctatgtgggggcagatttggctgcactggttaaagaggctgcaatgcgcgca
ttgagaagggtcatacctgaaattgaccttgaaatggagaaaataccggtggaaatactg
gagaaattgcaggtaacttgggaggactttatggacgcatatagggaaatgcagcccagc
acgatgagggaggtgcttatagaaaagccgaatatccattgggacgatataggaggtttg
gagcaggtaaagcaagagttgcgcgaggttgtagaatggcccatgaagtatcgtaagtta
tttgctcatatgaaggtcaagattcctaagggcatactactttatggacctccaggcaca
ggtaagaccctgcttgccaaggcagtggctactgagagtgaggcgaacttcataagtgtt
aaaggtccagagttcctgagcaagtgggttggggagagtgagaaggccgtgcgcgaggta
ttccgtaaggcaagacaggcagcaccggcggttatattcatagatgagatagatgccatt
gcaccaatgcgaggaagagatataggctcccatgtcacagagcgtgtggtatctcaaata
ttgaccgagatggatggtctggaagaattgcacaatgttacggttatagcagccacaaat
cgtccggatatacttgatccagctttacttaggcccgggaggttcgatcgcatagtgtat
gtacctattccagataaggatgcgagaaaggaaatcttcaagatacatctccgtggcagg
ccattggcagaggatgtggacatagataagcttgctgagaaaacagaaggatatacgggc
gcagatatagaggctgtatgcaatgaagcaacgatacttgcactgagagagttcatacag
agcggtaagaatcccgatgaaccaaaggatgcaaagattgaaatgaagcactttgaggaa
gccctgaagaaagtaaaaccactttcaaaagaagaaagagaaatgtacgagagaatggtg
gatcgctttagaaagagggaatga
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