Aciduliprofundum boonei: Aboo_0473
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Entry
Aboo_0473 CDS
T01180
Name
(GenBank) Transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
abi
Aciduliprofundum boonei
Pathway
abi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Aboo_0473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abi03021
]
Aboo_0473
Transcription machinery [BR:
abi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Aboo_0473
Prokaryotic type
Archaeal type
TFB
Aboo_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
RB_B
Zn_ribbon_LysW
BRF2-like_C_cyclin_rpt
Cyclin_N
Zn_ribbon_IS1595
HTH_AsnC-type
Zn_ribbon_PaaD
Lar_restr_allev
DUF7573
Zn_ribbon_3
Auto_anti-p27
UPF0253
Trm112p
Zn_ribbon_tTFIIB
Zn_ribbon_8
HTH_Tnp_ISL3
Zn_ribbon_9
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
ADD08284
UniProt:
B5IA78
LinkDB
All DBs
Position
464331..465269
Genome browser
AA seq
312 aa
AA seq
DB search
MGEKDKRKWIDEITRCPECGSTHLVRDYERGELVCMDCGLVIDESYIDQGPEWRAFDSEQ
RDSRTRTGAPMTYTIHDKGLSTEISWKNKDSYGKNIPTRSRAQLYRLRKWQKRIRVSNSA
ERNLSQALQELERMSSNLGLPKDVRETAAVIYRKAVKENMIRGRSIEGVVAASIYAACRM
LGIPRTLEEISTVTRIKKREIGRVYRIMSRTLKLNIYPTKPEDYIDRFCSKLKLSGEVKK
KAYEIIKMARERDIISGRGPTGVAAAAIYIAAILMGERRTQREVAEVAGVTEVTIRNRYK
ELAEKLNLPVEV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaaagataagaggaaatggatagacgagattacgagatgcccagagtgtggc
tctacacatcttgttagggattacgagaggggtgagcttgtatgtatggattgtggactc
gttatagatgaatcttacatagatcaaggtcctgaatggagggcatttgattccgagcag
agagattctcgcactagaactggagctccgatgacatacacgattcacgataaaggtctc
agcacagaaatttcttggaaaaacaaagattcctatgggaaaaatatacccacaagaagc
agggcccagctgtataggttgcgtaaatggcagaagagaattcgagttagtaactcagcc
gagaggaacttaagtcaagcgcttcaagaattggaacgaatgtcatcaaatttgggattg
cctaaggatgttcgtgaaacagccgccgtgatttatcgcaaggcggttaaggaaaatatg
attcgtgggagaagcatagagggtgttgttgctgcgagcatttatgctgcttgtagaatg
ctcggaattccgcgcacccttgaagagatatcaacggttacgaggataaagaaaagggag
ataggaagggtttatcgtataatgagtagaacactgaagttgaatatatatccaacgaag
ccggaggattatattgatagattctgttctaaactaaaattgagcggcgaggttaaaaag
aaggcatatgagataataaagatggcaagggaaagggatataatctctggaagaggtcct
acaggggtagcagctgcagccatatacatagcagccatacttatgggcgagagaaggaca
cagagagaagtggccgaagttgcgggggtcaccgaagtgaccataagaaatcgctataaa
gaacttgcagagaaattgaatttgcctgtggaagtttga
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