KEGG   Aciduliprofundum boonei: Aboo_0490
Entry
Aboo_0490         CDS       T01180                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
abi  Aciduliprofundum boonei
Pathway
abi03030  DNA replication
abi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:abi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Aboo_0490
   03410 Base excision repair
    Aboo_0490
   03450 Non-homologous end-joining
    Aboo_0490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abi03032]
    Aboo_0490
   03400 DNA repair and recombination proteins [BR:abi03400]
    Aboo_0490
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:abi04147]
    Aboo_0490
DNA replication proteins [BR:abi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Aboo_0490
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Aboo_0490
DNA repair and recombination proteins [BR:abi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Aboo_0490
Exosome [BR:abi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Aboo_0490
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 VapC50_C DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: ADD08301
UniProt: B5IA63
LinkDB
Position
complement(476969..477988)
AA seq 339 aa
MGVNIADIIIAHEINIKELKGKIISVDAYNALYQFLSIIRQPDGTPLRDHAGRVTSHLSG
LLYRTANFLAEGIKPVYVFDGRPPELKMRTIGERIKIRMEAKEAWEKALKEGNLEEARSK
AQQATFLTKDMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDFDSLLFG
APNLVRNLAITGKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVGTDYNEG
IKGVGPKTALKLIKKYGSLEKIIQERGYTIPHYKEIKDIFLNPPVTDSYKLEWRAFDEEK
LIDFLCEEHDFSRDRVMSAIEKMRAFKKYREQRSLDSWF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgggagtaaatattgctgatataatcattgcccacgagataaatattaaagaactgaag
gggaaaattatatccgtagatgcttacaatgcactttaccaatttttaagcataataagg
caaccggatggtacacccctgagagaccatgctggcagagttacctcccatctttcaggt
cttctttacagaactgcaaattttcttgctgaaggaattaaacccgtgtatgtttttgat
ggaagacctccagaattgaagatgagaacgataggggagaggataaaaataagaatggag
gcaaaggaggcatgggaaaaagccctaaaggagggaaatttggaagaagcgaggagcaag
gcacagcaggccacattcttgaccaaggatatggtggatgaagccaaaaagctgttagat
tatatgggcattccatgggttcaagcgcccagcgaaggagaggcgcaagcagcatatatg
gcgaaaaaaggagatacatatgcctctgcttctcaggatttcgattcccttctatttggc
gccccaaatttagttagaaatctcgccattacgggcaagagaaaattaccaagaaagaat
gtttatgtggatgtaaagccagagattatattactcgaggaaaatttgaagaatttgggg
attagcagggagcagcttgtagatataggaattttagtaggcacagattacaatgaggga
ataaaaggcgtgggcccaaaaactgcattaaaactcataaaaaaatacggctcattagag
aagataatccaggagagaggatacactataccccattacaaggagataaaagacatattt
ctgaatcctccggtaacagattcttacaaacttgaatggagagcttttgatgaggaaaaa
ttgatagattttctatgcgaggagcacgacttctcaagagatagggtgatgagtgcaatt
gagaagatgagagctttcaagaagtacagagagcagagaagtttagattcttggttctaa

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