Aciduliprofundum boonei: Aboo_0572
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Entry
Aboo_0572 CDS
T01180
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
abi
Aciduliprofundum boonei
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abi03016
]
Aboo_0572
Enzymes [BR:
abi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Aboo_0572
Transfer RNA biogenesis [BR:
abi03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Aboo_0572
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
YozD
Motif
Other DBs
NCBI-ProteinID:
ADD08383
UniProt:
B5I9Y4
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All DBs
Position
551063..551932
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AA seq
289 aa
AA seq
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MKRTICNSLADKLYSRGFGNRDGKCIELSWVEFAYLSEKGILDYDFEDVVKKASREVPNF
DILFIVYRDLRERGYVLKDRGNYFMGRKNYSMAFYPLSDMDYFDVSEFVEKQYPLILSIV
DFDGEVTYYLVDMVEPKGTYFKIPKEELNFEIYGKRAFVFTNLQDFENLTYGRNEGTWGH
LSLLEIKYLAENGVVGKNPQVEGVYDIYKDLRNRGLIVKSGFKYGTHFRVYENSMEEHSK
YLVHLISEREEIQKISRAVRVAHGVRKTLLLAHNLNGKIVYFSVSWIRP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacaatttgcaactctcttgcggacaagctttattcaagaggttttgggaat
agagatgggaaatgcatagaactctcttgggttgagtttgcatatctctccgagaaagga
attttggattacgattttgaagatgttgttaagaaagcatctagagaagtaccaaatttt
gatattctattcatcgtttacagggatttgagggagcgtggctatgttttgaaggatagg
ggcaattattttatgggccgcaagaactattcaatggctttttaccctctttccgatatg
gattattttgatgtgagtgaatttgtagagaagcaataccccttaatcctatccatcgtg
gattttgatggagaagtaacctattatttggttgatatggtagagcctaagggaacttat
ttcaaaattcccaaagaagagctgaattttgagatttatgggaaaagggcttttgttttt
acaaatttgcaggattttgagaatttgacatatggaaggaacgagggaacatgggggcat
cttagcctgcttgaaattaaataccttgcggaaaatggggtggtgggaaaaaatccacaa
gttgaaggagtttatgatatttacaaggatttgagaaataggggtttgatagtaaaatcg
ggattcaaatacggcactcattttagagtttatgagaatagtatggaagagcattccaag
tacctcgttcatttaatttccgagagagaagagattcagaagataagccgtgcagttcgt
gttgcccatggagttagaaaaactctgcttcttgcacataatttaaatgggaaaattgtt
tatttcagtgtatcttggatcaggccttaa
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