Aciduliprofundum boonei: Aboo_0605
Help
Entry
Aboo_0605 CDS
T01180
Name
(GenBank) Zinc finger TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
abi
Aciduliprofundum boonei
Pathway
abi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Aboo_0605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abi03021
]
Aboo_0605
Transcription machinery [BR:
abi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Aboo_0605
Prokaryotic type
Archaeal type
TFB
Aboo_0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Cyclin_N
ORC6
UPF0253
Zn_ribbon_LysW
A2L_zn_ribbon
DUF6398
RB_B
BRF2-like_C_cyclin_rpt
Lar_restr_allev
DUF7573
Ribosomal_S27e
Zn_ribbon_IS1595
KORA
Trm112p
Sigma70_r4_2
Zn_ribbon_tTFIIB
DUF7342
Zn_ribbon_RRN7
HTH_Tnp_ISL3
Zn_ribbon_3
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ADD08416
UniProt:
B5I9V2
LinkDB
All DBs
Position
579993..580934
Genome browser
AA seq
313 aa
AA seq
DB search
MGDMMAKRPKEEFIKQCPECGSTHLIWDYERGELVCGDCGAVIEDSFIDQGPEWRAFDAE
QDEKRARTGAPLTFLSHDKGLATEISWSNKDSYGKRIPHKNRAQIYRVRKWHQRIRVSNA
AERNLSVALQELNNVSSKMGLPKDVRETAAIIYRKAVEKNLIRGRSIESIVAASIYAACR
KVGMPRTLDEVAKASELNKKKIGRAYRHLTKELNLNLKPTTATSYITQFCSKLHLDKNVV
NKAEEIVQQATERGITSGKGPTGVAAAAIYIAANMMNEPRTQKEIAEVAGVTEVTIRNRY
KEISSALNVEIPK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatgatggcaaagagacctaaagaagagtttataaagcaatgtccagagtgt
ggctccacccatcttatatgggattatgagcggggagagctggtgtgtggagactgtggg
gctgtaatcgaagattcgtttattgatcagggcccggaatggagagcatttgatgctgag
caggatgaaaagagggcaagaacgggagcaccattaacttttttatcgcatgataagggc
cttgcgaccgagatatcttggagcaataaagattcttatggaaagaggataccgcacaag
aatcgtgctcaaatttaccgtgtgcgcaaatggcatcagaggattcgtgttagcaatgca
gcagagagaaacttgtctgtggctttgcaggaattgaataatgtatcaagcaagatgggc
ttgccgaaggatgttcgcgaaacagccgcaattatatatcgcaaggcggtggaaaagaac
ttgataaggggaaggagtatagagagcatagtggctgcaagcatatatgcagcgtgccgc
aaggttggaatgcctcgcaccttggatgaagttgcaaaagcgagtgagttgaataagaag
aaaattggtcgtgcgtataggcatctcactaaggaattgaatttaaatctaaagcccact
acggccacatcctatataactcaattctgcagtaaattgcatttggataagaatgtggta
aataaagccgaggaaattgtgcagcaggctacggagagaggtataacatcaggtaaggga
cctacaggagtggcagcggctgccatatacatagctgccaacatgatgaacgagccaagg
acccaaaaagaaatagctgaagtggcgggagttacagaggtcacaattagaaatcgctat
aaggagatttcatcagcgctcaatgttgagatacccaagtga
DBGET
integrated database retrieval system
