Aciduliprofundum boonei: Aboo_0637
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Entry
Aboo_0637 CDS
T01180
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
abi
Aciduliprofundum boonei
Pathway
abi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Aboo_0637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abi03400
]
Aboo_0637
Enzymes [BR:
abi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Aboo_0637
DNA repair and recombination proteins [BR:
abi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Aboo_0637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
ADD08448
UniProt:
D3TD13
LinkDB
All DBs
Position
609802..610806
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AA seq
334 aa
AA seq
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MYRFGLAGIPLSCKGRTLKDAIEDTHRMGLHAMEIQFLRVNVQERSVYDEVGLKPREIET
SLIVDVLRPDDEGNYQPVGIDVALEEDDIVLELFWNLANSYVELRKLGDLAKELDVQLSL
HTPYYMDLISNGELTEKSMEYIIWGGLLANEMGGKYVVNHIGLYGDLSKAAAMKNVVENV
KKLKNEYKRLKLKPKLGFEVSGKQVVFGSLDEILNLCKKVKGILPIVNFAHIHARTNGSL
KDAKKFEEIFEKISPFWKDEYYVHFAGVFYENGNETMIAPIKKGDLKFETLANVILKNEY
NITLISSSPLLEHDAAYMRVIMERVLARKLAKKK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttggtcttgctggaatacctctttcgtgcaagggacgcacacttaaagat
gcgatagaggatacgcataggatgggcctccacgctatggaaattcaatttctcagggtc
aatgtgcaggagagaagcgtgtatgatgaagtgggtttaaagccaagggaaatagaaact
tcgttgatagttgatgttttgcgccccgatgatgagggcaactatcagcctgtgggaata
gatgttgctctggaggaggatgatatagttctcgaacttttttggaaccttgccaatagt
tatgttgaattgagaaagcttggtgatttggctaaggaattggatgtgcagcttagtttg
cacaccccatactatatggaccttatttccaatggggagcttactgagaaatcaatggag
tacataatttggggagggctgttggctaatgagatggggggcaagtatgtggtaaatcat
attgggctatacggggatttgagcaaagcagcggccatgaaaaatgtggtagaaaatgtt
aagaagctgaaaaatgagtataagagattgaaactcaaaccaaagttgggatttgaagta
tcaggtaagcaggttgtttttggcagtttggacgagattttgaatttgtgcaagaaagtt
aagggaatattacccattgtgaattttgcccatatccacgcaagaacaaacggctccctt
aaagatgccaagaagtttgaagaaatatttgaaaaaatatctccgttctggaaagatgaa
tattatgtacactttgcaggagttttctatgagaatggaaatgaaacaatgatagcacca
ataaagaaaggagatctaaaatttgagactcttgcgaatgttattttgaagaatgaatac
aatatcactctgatttcctcctcgccccttttagagcatgatgcggcgtatatgcgtgtt
ataatggaaagggttctcgcaaggaaacttgccaagaagaagtga
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