Aciduliprofundum boonei: Aboo_0855
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Entry
Aboo_0855 CDS
T01180
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
abi
Aciduliprofundum boonei
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abi03400
]
Aboo_0855
DNA repair and recombination proteins [BR:
abi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aboo_0855
Archaeal homologous recombinant proteins
Aboo_0855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
AAA_29
NPV_P10
TPR_MLP1_2
AAA_21
AAA_13
Fez1
GAS
Motif
Other DBs
NCBI-ProteinID:
ADD08664
UniProt:
B5IAI0
LinkDB
All DBs
Position
820276..822684
Genome browser
AA seq
802 aa
AA seq
DB search
MIIRKIHLHNIRSYEDQDIELGKGITLFEGDIGSGKTTILMAIDFALFGNSTPDFYRSLL
RKGTNRGFVEIIFEHGGKEYKIRRVLEAKGKGISNTESEVEAPEGVVKLTASDVRNYVLK
LMGIDVGSSKRKSLPVVKYAIYTPQEMMKVILEGTGKKEEERLDVIRRIFRLDEYKVARE
NIGIVSKELVSEYRTVESKEEEIGRIESEVKEKELEIKKIEEEIKELNEKITQYEREYER
KSKEWKEVMKLRDRYENLRREIEKLKTKILGFKENLNKANKELEEIEVIKEKMKNIEEEA
QRYESVEKIRDELQRKLNDIMNTEIRFKKAQERIKVLKEKIEKAKNLRVELEKLKSRKNE
LESKTAKIEDLENRKKDLEERRSEIRGVIAAINTKIEELRKELEDYKSLGAVCPKCKRPL
TEEHKKKLISETIAKIEDKKEELRRANASEVKIKREMREIDEEIRELQENAKALSAIQER
IKHIEDSIKEGEEAEKELEIAERNLPIFDEEEKRKMSEELEKVKFEVERLRNVWREYNAL
KGRVEREGKIIEEIKNYKFEIEGMEKELQRKSKEINSLNYSDDVFKKLSEEYREIEGILS
SAKRVKEEKEKRVEELKNEIDKKMKLIEKLRDEIKLYKKHVEFGKWLRDELAQALEEIER
LRLLSINEEFRQLFEDWFHEIMGESEYEATIDEDFKPIVRYQKFDMPIYSLSGGERTSIA
LAYRLALNTMVKRSLNLESHLLILDEPTDGFSKDQLYKLKDVFDKMDTDQIIIVSHEKEL
MNLADTVYHVEKVNGVSKINKI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgataatacgcaagattcatctccataacataaggagctacgaagatcaagatatagaa
ttgggaaagggcataactctctttgagggggatataggaagtggaaagaccacaatttta
atggccattgattttgccctgtttggcaattccactccagatttttacagaagtttgctg
cgcaaaggcacaaataggggattcgtagagataatttttgagcatggaggaaaggagtac
aagataagaagagttttggaggcgaagggcaagggcataagcaacacggaatctgaagtt
gaagcaccagaaggagttgtgaaattaacagcgagcgatgttaggaactatgttttaaag
ttaatgggcattgatgttggctcaagtaagagaaaatccttgcctgtggtaaagtatgca
atatacacgcctcaagagatgatgaaggtaattttagaaggtactggaaagaaggaagaa
gagcgtcttgatgtaattcgcagaatatttaggttagatgagtacaaagttgctagggag
aatattggaattgtttccaaggagttggtttcagagtacagaactgttgagagtaaggag
gaagaaattggaaggatagaaagcgaggtgaaagagaaagaattggagataaagaaaatt
gaagaagagataaaagagctgaatgagaaaattacccaatatgaaagagagtatgaaagg
aagagcaaagaatggaaagaggttatgaaattaagggacaggtacgagaaccttcgaaga
gagattgaaaagttaaaaactaaaattttgggattcaaagagaatttaaataaggcaaat
aaggaacttgaagaaatagaggttataaaagaaaagatgaaaaatatagaagaggaagca
caaaggtatgagagtgttgaaaaaattagagatgagttgcagagaaagctcaacgatata
atgaatacggagataagattcaaaaaggctcaagagcgtataaaggtgttaaaggaaaag
atagaaaaggcgaaaaatctgagagtggaattagagaaattgaaatctaggaaaaatgag
ttggaaagtaaaactgcgaagattgaagatcttgaaaacaggaagaaggatttagaagag
aggaggagtgagataagaggtgtgattgcagccataaacacaaagatagaagagcttaga
aaagagcttgaagattacaaatctctgggtgcagtttgtccaaaatgcaagagacctctt
acagaagagcataaaaagaaattgattagtgagacgattgctaagattgaagataaaaaa
gaagagcttagaagggcaaacgcttctgaggtaaagataaagagagaaatgcgggaaatt
gatgaagagataagagagctccaagagaatgcaaaagctctctctgcaattcaggagagg
ataaagcatatagaagattcaataaaggagggtgaagaagcagagaaggaactagagatt
gcagagcgaaatttgcccatatttgatgaagaagagaagagaaagatgagcgaggaattg
gagaaggttaaatttgaagttgagagattgagaaatgtttggagagagtataatgcttta
aaaggaagggtggaaagagagggtaaaataattgaagagataaaaaattataagtttgaa
attgaagggatggagaaagaactgcaaaggaaaagcaaagaaataaactctttgaattac
agtgatgatgtattcaaaaagctcagcgaggaatacagagagattgaaggaatattgagt
tctgcaaagagagtaaaggaagagaaagaaaaaagggttgaagagctaaaaaatgaaatt
gataagaagatgaaattgattgaaaagttaagagatgaaattaagctctacaagaaacat
gttgagtttggaaaatggctgagggatgagttagcccaagccttggaagagatagagaga
ttaagattactttctataaatgaggagtttagacagctattcgaggattggttccatgag
ataatgggcgagagcgagtatgaagctacaatagatgaagatttcaagcccatcgtgaga
taccagaaatttgatatgcccatatattccctaagtggcggtgagagaacatctatagct
cttgcttataggttggctctaaataccatggttaagagaagtttaaatttggagtcacac
ctgctcatacttgacgagcccaccgatggttttagcaaagatcaactctacaaattaaag
gatgtatttgacaaaatggatacggatcagataataattgtaagccacgagaaagagcta
atgaatcttgcagatacagtgtaccatgtggaaaaggtaaacggagtatcaaaaataaat
aaaatctga
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