Aciduliprofundum boonei: Aboo_0864
Help
Entry
Aboo_0864 CDS
T01180
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
abi
Aciduliprofundum boonei
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Aboo_0864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abi03021
]
Aboo_0864
03019 Messenger RNA biogenesis [BR:
abi03019
]
Aboo_0864
Transcription machinery [BR:
abi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Aboo_0864
RNA polymerase I system
Aboo_0864
Messenger RNA biogenesis [BR:
abi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Aboo_0864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
Ribosomal_uL24m-like
NusG
KOW2_Spt5
DUF7356
KOW1_SPT5
DUF863
Motif
Other DBs
NCBI-ProteinID:
ADD08673
UniProt:
B5IAH1
LinkDB
All DBs
Position
complement(828595..829428)
Genome browser
AA seq
277 aa
AA seq
DB search
MIDVSLNTELFRIPAGRIAEIVIVISNKGEKKEKVTFKVLSQLNMKDPSLEWSVNIIGVE
KDEVKLLVTKEENKELEYELQVQPNKRKEIYVNITAPRAAEIGDYGIFKFEVIHSEGLWS
KDVRINIEAAIVAVKTTIGQEVKVARDIGMKAKIHGWKEIFSVLAPYNLKGYVFVETSRP
DKVLSLIRGIKDAKGVVRGEMHLEEIKHYLTPTPTIHRISVGDIVELVEGPFKGEHAKVI
QIDEAKDEITVELFEAMVPIPITVKAEAVRLLEKEGE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgttagcttaaatactgaacttttcagaattccagctggaaggatagccgaa
atcgttatcgttatatcaaacaaaggtgagaaaaaagagaaagtcacattcaaagttctg
tcccaactaaatatgaaagaccccagtttagagtggagtgtcaacataattggagttgaa
aaggatgaggtaaaactcttagttacgaaggaagaaaacaaagagcttgagtatgaactt
caagtgcaaccaaataagagaaaagaaatatatgtgaatataacagctccaagagctgcc
gaaattggagattatggtatattcaaatttgaagttattcattccgagggcttgtggagt
aaggatgtgagaataaacatagaagccgccattgtagccgttaaaactacaataggacag
gaggtaaaagtggccagagatataggaatgaaagcaaagattcacggttggaaagaaata
ttttctgtacttgcaccctacaatttaaaaggatatgtttttgttgaaacttcaagacct
gataaggttctctccttaataagaggaataaaagatgcaaagggagtagtaaggggtgaa
atgcatcttgaagagataaagcattatctcactccaactccaacaatacatcgcatctca
gttggagatatagtagagcttgtagaaggtccattcaaaggcgagcatgctaaagtgata
cagattgacgaggcaaaagatgaaataacagttgagcttttcgaggcaatggtacctata
ccaataactgttaaggcagaagctgtgaggctattggagaaggaaggtgagtaa
DBGET
integrated database retrieval system
