Aciduliprofundum boonei: Aboo_1075
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Entry
Aboo_1075 CDS
T01180
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
abi
Aciduliprofundum boonei
Pathway
abi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Aboo_1075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abi03019
]
Aboo_1075
03009 Ribosome biogenesis [BR:
abi03009
]
Aboo_1075
04131 Membrane trafficking [BR:
abi04131
]
Aboo_1075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abi04147
]
Aboo_1075
Messenger RNA biogenesis [BR:
abi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Aboo_1075
Ribosome biogenesis [BR:
abi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Aboo_1075
Membrane trafficking [BR:
abi04131
]
SNARE
SNARE associated proteins
Others
Aboo_1075
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Aboo_1075
Exosome [BR:
abi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Aboo_1075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_14
AAA_22
AAA_5
TIP49
CDC48_2
AAA_33
nSTAND3
RNA_helicase
AAA_7
IstB_IS21
AAA_28
Mg_chelatase
Sigma54_activat
NPHP3_N
AAA_17
AAA_24
ATPase_2
ATPase
Parvo_NS1
DUF815
ABC_tran
AAA_18
Vps4_C
AAA_lid_PRS2_C
SLFN-g3_helicase
AAA_25
PhoH
AAA_19
AAA_3
TsaE
NB-ARC
AAA_11
Zeta_toxin
MCM
Zot
Motif
Other DBs
NCBI-ProteinID:
ADD08884
UniProt:
B5IH46
LinkDB
All DBs
Position
1031529..1033745
Genome browser
AA seq
738 aa
AA seq
DB search
MEKELILRVAEAPQMDVGLGRARLDTSSRMLLGLEVGDVIEIEGKRLTAARVFRSKQEDE
GRGVIRIDGHIRRNAKVTVGEKVKVRKAEPVEAQKIIIAPLIGKNQRLRFGEGIGDFIKR
VLLKRPVVEGDEIVVPNITLMGRTGILFQVVKTMPSKKVVQIGVQTIVEVREEPPTEIEE
LLEHVTYEDIGGLKDELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAK
AVANESNAHFYAINGPEIMSKFYGQSEERLREIFQNAQKNAPSIIFIDEIDSIAPKREEV
TGEVERRVVAQLLTLMDGLGKRGHIIVIGATNRIDAVDPALRRPGRFDREIEIGIPDKKG
RKEILQIHTRGMPIEGSPEEKDKLLEELAELTHGFVGADLAALAREAAMNALRRYLPKID
LDKPVPTEILENMKVTKEDFKEALKEIEPSVLREVMIEIPSVHWDEVGDLEEAKRILKEA
VELPLKNPEAFKRMGIRASKGILLYGPPGTGKTLLAKAVATESEANFISIKGPEVMSKWV
GESEKAIREIFKKAKQSSPCIVFLDEIDAIAPRRGYYGGSGVTERIVNQLLTSMDGLTTL
EGVVVIAATNRPDIVDPALLRPGRIDRIVYIEPPNEEARLKILKVHTKKMPLAEDVSLED
IAMRTEFYTGADLENLCREAGMAAIRENSEKVHMKHFEEALGVVHPSLDKETIKYYESIG
LELSKGVKAKKEDLGYYS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagagctcatacttagagttgccgaagcacctcagatggatgtggggttaggc
agagcaagattggatacttcatctcgtatgcttcttggcttggaagttggagatgtaatt
gagattgaaggaaaaagactcacagcggcaagggtatttcgctcaaagcaagaagatgag
ggtaggggagttataagaattgatggtcacataagaagaaatgctaaagtgactgttgga
gagaaggtgaaggtaagaaaggcagagcccgtagaggctcaaaaaataataattgcccca
ctcataggaaaaaatcagaggttgagatttggcgagggaataggggattttataaaaagg
gttcttctcaagagaccagtggtggagggggatgaaatagttgtgccaaacataacccta
atgggtagaactggtatacttttccaagttgtaaagactatgccctctaagaaagttgta
cagattggagtgcaaacaatagtggaagttagagaagagccgccaaccgagattgaagaa
ctcttggagcatgtaacctacgaggatattggagggctcaaagatgaacttcaaaaggta
agggagatgattgaactaccattgaagcatccagaactatttgagagattaggtattgaa
cctcccaaaggtgttctactctatggccctccaggaacgggcaagactctaatcgcaaag
gcagttgctaatgagagcaatgcccatttctatgcaattaatggacctgaaataatgagc
aagttctatggccagagcgaagagagattgagggaaatattccagaacgcgcagaaaaat
gctccgagcataatattcatagacgagattgactccatagccccgaagagggaggaagtc
acaggggaagttgagcgcagggttgttgcccagcttttgactctcatggatggattgggc
aaaagagggcatatcatagttataggcgctacgaacagaattgatgctgtagacccagca
ttacgcagacccggaaggtttgatagagagattgagataggcatacctgataagaaagga
aggaaagagattttgcagattcatactagggggatgccgatagagggctcacctgaagaa
aaagataagttgctggaagaacttgcggaattaactcatggctttgtaggtgctgatttg
gcagctcttgcaagggaagcagctatgaacgctctacgcagatatttaccaaaaattgat
cttgataagccagtgcctacagaaattttggaaaatatgaaagtcacaaaagaagatttc
aaagaagctttaaaggaaattgaaccaagcgtgcttagagaggttatgattgaaatacct
tctgttcactgggatgaggttggagatttagaagaggcgaagagaatactcaaagaggct
gtagagcttccgcttaaaaatccagaggctttcaagaggatgggcataagggcctccaaa
ggtattttgctctacggtcctcctggcacgggcaaaaccctattagccaaggctgtggct
actgaaagtgaagcaaatttcataagtataaaaggtcctgaagttatgagcaagtgggta
ggtgagagcgagaaggcaataagagagatcttcaagaaggcaaaacaatcctcgccctgc
atagtttttctcgatgagatagatgcaattgcacctaggcggggatattacggaggttct
ggagtgactgagagaattgtaaatcaactcttaacatctatggatgggttaactactctt
gaaggggtggtggtaatcgcagctacgaatcgtcccgatattgtagatcctgcattgctc
aggcctgggaggatagatagaattgtgtatatagagccaccaaacgaagaagcgagattg
aagatactaaaggtgcatactaaaaagatgccattggcagaggatgtgtctctggaagat
atagctatgcgcacagaattctatacaggagcagatttggagaatctatgcagggaggcg
ggaatggctgcaataagggagaatagcgagaaggtacatatgaaacattttgaagaggct
ttaggggtagtacatccttccttggataaagaaacaataaaatactacgaaagcattggg
ttagaattgagtaagggtgttaaagccaagaaggaggatttgggctattactcgtga
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